RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TSPAN18Q96SJ8 248 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 THTPAQ9BU02 230 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 UXTQ9UBK9 157 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 FETUBQ9UGM5 382 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 ZNF180Q9UJW8 692 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 TDRD15B5MCY1 1934 aaKnown RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 A6NHS1 94 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 ARVCFO00192 962 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 GLDCP23378 1020 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 MAGEA6P43360 314 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 NAGLUP54802 743 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 SCAPQ12770 1279 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 FAM43BQ6ZT52 329 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 TREML1Q86YW5 311 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 PPHLN1Q8NEY8 458 aaKnown RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 CFAP61Q8NHU2 1237 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 LRMDAQ9H2I8 198 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 ETAA1Q9NY74 926 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 PLK2Q9NYY3 685 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 TRHDEQ9UKU6 1024 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 GOLGA4Q13439 2230 aaKnown RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 A8MX80 341 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 CBX4O00257 560 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 ATP5HO75947 161 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 AHSGP02765 367 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 CYP11A1P05108 521 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 MLNP12872 115 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 TSHRP16473 764 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 SCNN1BP51168 640 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 MLLT6P55198 1093 aaPredicted RBP14.07□□□□□ -0.16
TRIM4-201ENST00000349062 PLD1Q13393 1074 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 ZNF235Q14590 738 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 PDCD2Q16342 344 aaPredicted RBP14.07□□□□□ -0.16
TRIM4-201ENST00000349062 MARK2Q7KZI7 788 aaKnown RBP14.07□□□□□ -0.16
TRIM4-201ENST00000349062 TEX9Q8N6V9 391 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 EFHBQ8N7U6 833 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 PHF21BQ96EK2 531 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 RBBP8Q99708 897 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 CPNE1Q99829 537 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 SEMA3CQ99985 751 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 SMOC2Q9H3U7 446 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 RRN3Q9NYV6 651 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 PRSS56P0CW18 603 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 GNAZP19086 355 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 RANBP1P43487 201 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 PRAMEP78395 509 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 CNSTQ6PJW8 725 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 OR6K2Q8NGY2 324 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 BCL7CQ8WUZ0 217 aaPredicted RBP14.07□□□□□ -0.16
TRIM4-201ENST00000349062 RMDN1Q96DB5 314 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 NSL1Q96IY1 281 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 IL22Q9GZX6 179 aa14.07□□□□□ -0.16
TRIM4-201ENST00000349062 MTMR11A4FU01 709 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 RAMP2O60895 175 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 DHRS4L1P0CG22 281 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 PCLAFQ15004 111 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 LHX8Q68G74 356 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ATG14Q6ZNE5 492 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ZNF781Q8N8C0 355 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 UROC1Q96N76 676 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 PHACTR1Q9C0D0 580 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 DCLRE1BQ9H816 532 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 HBS1LQ9Y450 684 aaKnown RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 UBA6A0AVT1 1052 aaPredicted RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ARHGEF37A1IGU5 675 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 MTSS1O43312 755 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ARSAP15289 507 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 RBM20Q5T481 1227 aaKnown RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 NAPRTQ6XQN6 538 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 RTL3Q8N8U3 475 aaKnown RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 IRGQQ8WZA9 623 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 NXNL1Q96CM4 212 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 IFT43Q96FT9 208 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 PKMYT1Q99640 499 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 NAT9Q9BTE0 207 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ZYG11BQ9C0D3 744 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 HIPK3Q9H422 1215 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 FBXO44Q9H4M3 255 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 NMRAL1Q9HBL8 299 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 AAR2Q9Y312 384 aaKnown RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 LRRC42Q9Y546 428 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ZNF487B1APH4 448 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 MATN3O15232 486 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ANXA9O76027 345 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 EOMESO95936 686 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ETS2P15036 469 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 PTPN4P29074 926 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 ARRB2P32121 409 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 SERPINB8P50452 374 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 SEMG2Q02383 582 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 SHKBP1Q8TBC3 707 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 SEPT8Q92599 483 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 MIPEPQ99797 713 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 TLR8Q9NR97 1041 aaKnown RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 GTSE1Q9NYZ3 720 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 COPG2Q9UBF2 871 aa14.06□□□□□ -0.16
TRIM4-201ENST00000349062 DCDC2Q9UHG0 476 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms