RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 MRPL58Q14197 206 aaKnown RBP21.61■■□□□ 1.05
PTPN18-202ENST00000347849 TIFABQ6ZNK6 161 aa21.61■■□□□ 1.05
PTPN18-202ENST00000347849 PDZD4Q76G19 769 aaPredicted RBP21.61■■□□□ 1.05
PTPN18-202ENST00000347849 NUP93Q8N1F7 819 aa21.61■■□□□ 1.05
PTPN18-202ENST00000347849 CRIPAKQ8N1N5 446 aa21.61■■□□□ 1.05
PTPN18-202ENST00000347849 SIKE1Q9BRV8 207 aa21.61■■□□□ 1.05
PTPN18-202ENST00000347849 UBE2OQ9C0C9 1292 aaKnown RBP21.61■■□□□ 1.05
PTPN18-202ENST00000347849 MPP6Q9NZW5 540 aa21.61■■□□□ 1.05
PTPN18-202ENST00000347849 POMPQ9Y244 141 aa21.61■■□□□ 1.05
PTPN18-202ENST00000347849 DFFAO00273 331 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 F7P08709 466 aaPredicted RBP21.6■■□□□ 1.05
PTPN18-202ENST00000347849 NFKB1P19838 968 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 PDE1CQ14123 709 aaPredicted RBP21.6■■□□□ 1.05
PTPN18-202ENST00000347849 ARHGAP12Q8IWW6 846 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 CNTD1Q8N815 330 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 EIF2B3Q9NR50 452 aaKnown RBP21.6■■□□□ 1.05
PTPN18-202ENST00000347849 SLC4A7Q9Y6M7 1214 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 BPTFQ12830 3046 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 TPP1O14773 563 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 ALDOAP04075 364 aaKnown RBP21.6■■□□□ 1.05
PTPN18-202ENST00000347849 PABPC4LP0CB38 370 aaKnown RBP21.6■■□□□ 1.05
PTPN18-202ENST00000347849 RAG1P15918 1043 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 CCR1P32246 355 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 C10orf107Q8IVU9 208 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 ACTRT2Q8TDY3 377 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 PPP4R1Q8TF05 950 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 COMMD3-BMI1R4GMX3 469 aa21.6■■□□□ 1.05
PTPN18-202ENST00000347849 SYN3O14994 580 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 MLNP12872 115 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 BFSP2Q13515 415 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 PDK3Q15120 406 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 MANEALQ5VSG8 457 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 PDPK2PQ6A1A2 396 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 OTOP3Q7RTS5 596 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 SATL1Q86VE3 508 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 B4GALNT2Q8NHY0 566 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 HAPLN3Q96S86 360 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 SCML2Q9UQR0 700 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 PCDHB5Q9Y5E4 795 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 HS3ST4Q9Y661 456 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 SHROOM3Q8TF72 1996 aa21.59■■□□□ 1.05
PTPN18-202ENST00000347849 KCNU1A8MYU2 1149 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 PLIN3O60664 434 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 ALDH2P05091 517 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 NFE2Q16621 373 aaPredicted RBP21.58■■□□□ 1.05
PTPN18-202ENST00000347849 RNF19BQ6ZMZ0 732 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 FRMD7Q6ZUT3 714 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 NAT14Q8WUY8 206 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 CMTM5Q96DZ9 223 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 SORT1Q99523 831 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 FERMT1Q9BQL6 677 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 OCEL1Q9H607 264 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 ELAC1Q9H777 363 aaKnown RBP21.58■■□□□ 1.05
PTPN18-202ENST00000347849 PSAT1Q9Y617 370 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 SCN5AQ14524 2016 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 NCAM2O15394 837 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 ITGAXP20702 1163 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 ARRB2P32121 409 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 GMPRP36959 345 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 LSAMPQ13449 338 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 PCLAFQ15004 111 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 PPM1JQ5JR12 505 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 STEAP4Q687X5 459 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 KCTD11Q693B1 232 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 FUBP3Q96I24 572 aaKnown RBP eCLIP21.58■■□□□ 1.05
PTPN18-202ENST00000347849 C8orf48Q96LL4 319 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 FCRL3Q96P31 734 aaPredicted RBP21.58■■□□□ 1.05
PTPN18-202ENST00000347849 SLC39A8Q9C0K1 460 aa21.58■■□□□ 1.05
PTPN18-202ENST00000347849 STN1Q9H668 368 aaKnown RBP21.58■■□□□ 1.05
PTPN18-202ENST00000347849 E2F8A0AVK6 867 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 OR6B1O95007 311 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 SERPINE1P05121 402 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 MX2P20592 715 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 FGFR3P22607 806 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 GRAMD1BQ3KR37 738 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 BRMS1LQ5PSV4 323 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 PIK3R6Q5UE93 754 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 FUT10Q6P4F1 479 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 PRSS55Q6UWB4 352 aaPredicted RBP21.57■■□□□ 1.04
PTPN18-202ENST00000347849 MON1AQ86VX9 555 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 PHTF2Q8N3S3 785 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 JADE3Q92613 823 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 ATP2A3Q93084 1043 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 LRFN2Q9ULH4 789 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 RAD54BQ9Y620 910 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 TBKBP1A7MCY6 615 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 GLRA3O75311 464 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 AP2A1O95782 977 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 GALTP07902 379 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 CPB1P15086 417 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 CNTFP26441 200 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 TBL3Q12788 808 aaKnown RBP21.57■■□□□ 1.04
PTPN18-202ENST00000347849 GRM2Q14416 872 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 DEFB128Q7Z7B8 93 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 FBXW8Q8N3Y1 598 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 SEPT8Q92599 483 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 TEKT5Q96M29 485 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 TRIM62Q9BVG3 475 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 GBA3Q9H227 469 aa21.57■■□□□ 1.04
PTPN18-202ENST00000347849 CLIC5Q9NZA1 410 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms