RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CHD7Q9P2D1 2997 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 MIA3Q5JRA6 1907 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 IQANK1A0A1B0GTG1 560 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 FAM159BA6NKW6 160 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 TCP11X1B4DZS4 312 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 EBAG9O00559 213 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 KHNYNO15037 678 aaKnown RBP9.39□□□□□ -0.91
ATG4A-202ENST00000345734 AXIN1O15169 862 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF189O75820 626 aaPredicted RBP9.39□□□□□ -0.91
ATG4A-202ENST00000345734 ABLIM3O94929 683 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 GJB5O95377 273 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 ASMTLO95671 621 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 GSTA2P09210 222 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 HMGA1P17096 107 aaKnown RBP9.39□□□□□ -0.91
ATG4A-202ENST00000345734 CA4P22748 312 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 FOXN2P32314 431 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 TUFMP49411 452 aaKnown RBP9.39□□□□□ -0.91
ATG4A-202ENST00000345734 RACK1P63244 317 aaKnown RBP9.39□□□□□ -0.91
ATG4A-202ENST00000345734 DSG1Q02413 1049 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF33AQ06730 810 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 NADSYN1Q6IA69 706 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 KLHL23Q8NBE8 558 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 SPATA22Q8NHS9 363 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 VAT1Q99536 393 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 IL12RB2Q99665 862 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 ZYG11BQ9C0D3 744 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 CYP4F11Q9HBI6 524 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 CASS4Q9NQ75 786 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 MOCS1Q9NZB8 636 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 IL1RAPL1Q9NZN1 696 aa9.39□□□□□ -0.91
ATG4A-202ENST00000345734 IGLV3-10A0A075B6K4 115 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 TRIM49D1C9J1S8 452 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 MATN3O15232 486 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 MT-CYBP00156 380 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 AVPP01185 164 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 MT-ND3P03897 115 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 HLA-DQB2P05538 268 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 RAG1P15918 1043 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 TPH1P17752 444 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 PGAM1P18669 254 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 NUMBP49757 651 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 BMPR2Q13873 1038 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 CRYMQ14894 314 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 CERCAMQ5T4B2 595 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 OTOP2Q7RTS6 562 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 BANPQ8N9N5 519 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF461Q8TAF7 563 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 HMCESQ96FZ2 354 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 SEC16BQ96JE7 1060 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 FCRL3Q96P31 734 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 TMEM248Q9NWD8 314 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 GGT7Q9UJ14 662 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 SMG5Q9UPR3 1016 aaKnown RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 J3KR12 359 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 KIAA0355O15063 1070 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 CACNG3O60359 315 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ALDH1A2O94788 518 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 PEX11BO96011 259 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ACPPP15309 386 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 GBP2P32456 591 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 PLD1Q13393 1074 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 GRM2Q14416 872 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 C1QTNF12Q5T7M4 302 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 RINLQ6ZS11 566 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 SH2D5Q6ZV89 423 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 CHSY1Q86X52 802 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 UMODL1-AS1Q8N2C9 162 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 DNAAF3Q8N9W5 541 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 TCP10LQ8TDR4 215 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 MAGEB18Q96M61 343 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 RPRD1AQ96P16 312 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 TGS1Q96RS0 853 aaKnown RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 HERC2P3Q9BVR0 1158 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 GLOD4Q9HC38 313 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 FGFR1OP2Q9NVK5 253 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 RBM22Q9NW64 420 aaKnown RBP eCLIP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 SPG21Q9NZD8 308 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF212Q9UDV6 495 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF180Q9UJW8 692 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.38□□□□□ -0.91
ATG4A-202ENST00000345734 YIPF1Q9Y548 306 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 CHD5Q8TDI0 1954 aa9.38□□□□□ -0.91
ATG4A-202ENST00000345734 PDE4DIPQ5VU43 2346 aa9.37□□□□□ -0.91
ATG4A-202ENST00000345734 DOCK6Q96HP0 2047 aa9.37□□□□□ -0.91
ATG4A-202ENST00000345734 HMX2A2RU54 273 aa9.37□□□□□ -0.91
ATG4A-202ENST00000345734 DRGXA6NNA5 263 aa9.37□□□□□ -0.91
ATG4A-202ENST00000345734 ERI2A8K979 691 aaKnown RBP9.37□□□□□ -0.91
ATG4A-202ENST00000345734 COCHO43405 550 aa9.37□□□□□ -0.91
ATG4A-202ENST00000345734 FBXO24O75426 580 aa9.37□□□□□ -0.91
ATG4A-202ENST00000345734 ERVK-10P10266 1014 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms