RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SGPL1O95470 568 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 REXO5Q96IC2 774 aaKnown RBP19.55■□□□□ 0.72
HDAC4-201ENST00000345617 LACRTQ9GZZ8 138 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 MED11Q9P086 117 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 SCN8AQ9UQD0 1980 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 OR6A2O95222 327 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 CYP2A6P11509 494 aaPredicted RBP19.55■□□□□ 0.72
HDAC4-201ENST00000345617 TTPAP49638 278 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 SPP2Q13103 211 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 CYP2A13Q16696 494 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 LCN1P1Q5VSP4 162 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 METTL3Q86U44 580 aaKnown RBP19.55■□□□□ 0.72
HDAC4-201ENST00000345617 FAR1Q8WVX9 515 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 SMARCD1Q96GM5 515 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 QSOX1O00391 747 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 EPHA10Q5JZY3 1008 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 FAXCQ5TGI0 409 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 CAPN10Q9HC96 672 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 SAE1Q9UBE0 346 aaPredicted RBP19.55■□□□□ 0.72
HDAC4-201ENST00000345617 WDR37Q9Y2I8 494 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 BAZ2AQ9UIF9 1905 aaKnown RBP19.55■□□□□ 0.72
HDAC4-201ENST00000345617 ZBTB14O43829 449 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 ACSM2AQ08AH3 577 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 CBWD3Q5JTY5 395 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 CBWD5Q5RIA9 395 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 ACSM2BQ68CK6 577 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 NWD1Q149M9 1564 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 IFNA7P01567 189 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 PSME3P61289 254 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 GLT6D1Q7Z4J2 308 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 ITIH5Q86UX2 942 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 TLR10Q9BXR5 811 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 PTPN11Q06124 597 aaPredicted RBP19.55■□□□□ 0.72
HDAC4-201ENST00000345617 MTAPQ13126 283 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 HLA-DQA1Q5Y7H0 255 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 C12orf4Q9NQ89 552 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
HDAC4-201ENST00000345617 FAM240BA0A1B0GVZ2 78 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 POLD2P49005 469 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 VPS35Q96QK1 796 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 SP140LQ9H930 580 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 OSGEPQ9NPF4 335 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 RASSF1Q9NS23 344 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 ABI2Q9NYB9 513 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 PPP2R3BQ9Y5P8 575 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 GPC6Q9Y625 555 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 RPL9P32969 192 aaKnown RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 IL18Q14116 193 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 APOL3O95236 402 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 LTA4HP09960 611 aaKnown RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 SLC47A1Q96FL8 570 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 DHRS7Q9Y394 339 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 CST1P01037 141 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 TLX1P31314 330 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 SERPINB11Q96P15 392 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 DPP7Q9UHL4 492 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 DNPEPQ9ULA0 475 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 IFI35P80217 286 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 FOXO4P98177 505 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 PTPAQ15257 358 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 GPR107Q5VW38 600 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 C12orf56Q8IXR9 622 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 FBXL16Q8N461 479 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 KAT5Q92993 513 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 LRRC14BA6NHZ5 514 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 TRAFD1O14545 582 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 RAMP2O60895 175 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 METTL18O95568 372 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 PRLP01236 227 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 HLA-DQA2P01906 255 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 SREBF1P36956 1147 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 RHOAP61586 193 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 TRIM32Q13049 653 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 PGBD3Q8N328 593 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 CDHR5Q9HBB8 845 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 MTA2O94776 668 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 HMBSP08397 361 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 IRF1P10914 325 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 ADRA1DP25100 572 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 CYP2C18P33260 490 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 MAPK8P45983 427 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 CACNB3P54284 484 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 MYBPC3Q14896 1274 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 MEA1Q16626 185 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 FAM131AQ6UXB0 335 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 AGMOQ6ZNB7 445 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 C10orf107Q8IVU9 208 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 AIFM2Q9BRQ8 373 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 FAIM2Q9BWQ8 316 aa19.54■□□□□ 0.72
HDAC4-201ENST00000345617 SAMHD1Q9Y3Z3 626 aaKnown RBP19.54■□□□□ 0.72
HDAC4-201ENST00000345617 SASH3O75995 380 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ICAM1P05362 532 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 BMP7P18075 431 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 RFKQ969G6 155 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PTGFRNQ9P2B2 879 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 NDUFB10O96000 172 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 UMPSP11172 480 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ELP6Q0PNE2 266 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms