RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PDFQ9HBH1 243 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 POLR3BQ9NW08 1133 aaPredicted RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 AMACRQ9UHK6 382 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 MFHAS1Q9Y4C4 1052 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNCA-202ENST00000345009 CHD5Q8TDI0 1954 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 HACD1B0YJ81 288 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 KRIT1O00522 736 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 MATN3O15232 486 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 CD160O95971 181 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 TDGF1P13385 188 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 C5AR1P21730 350 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 SLC8A1P32418 973 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 MMP13P45452 471 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 CSNK1DP48730 415 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 PXNP49023 591 aaPredicted RBP12.02□□□□□ -0.49
SNCA-202ENST00000345009 AP1B1Q10567 949 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 XRCC4Q13426 336 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 LLGL1Q15334 1064 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 CST6Q15828 149 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 MYLK3Q32MK0 819 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 SLC36A4Q6YBV0 504 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 DPY19L3Q6ZPD9 716 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 USP30Q70CQ3 517 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 CEP68Q76N32 757 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 MMAAQ8IVH4 418 aaKnown RBP12.02□□□□□ -0.49
SNCA-202ENST00000345009 CCDC13Q8IYE1 715 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 TFB1MQ8WVM0 346 aaKnown RBP12.02□□□□□ -0.49
SNCA-202ENST00000345009 MAIP1Q8WWC4 291 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 NELL1Q92832 810 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 ERLEC1Q96DZ1 483 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 FAM129BQ96TA1 746 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 TM6SF2Q9BZW4 377 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 MTG2Q9H4K7 406 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 CD248Q9HCU0 757 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 ITM2CQ9NQX7 267 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 IL36AQ9UHA7 158 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 RAB23Q9ULC3 237 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 PPM1HQ9ULR3 514 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 PYCARDQ9ULZ3 195 aa12.02□□□□□ -0.49
SNCA-202ENST00000345009 H7C0C1 242 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 NDUFS2O75306 463 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 RPP40O75818 363 aaKnown RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 STK10O94804 968 aaKnown RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 CCNB1P14635 433 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 VAV1P15498 845 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 ATP5OP48047 213 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 PSMD8P48556 350 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 CCNHP51946 323 aaPredicted RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 COPAP53621 1224 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 GNG11P61952 73 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 RPS14P62263 151 aaKnown RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 PPIDQ08752 370 aaKnown RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 ITKQ08881 620 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 SLC10A2Q12908 348 aaPredicted RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 ZNF211Q13398 564 aaPredicted RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 CYTH1Q15438 398 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 CFAP58Q5T655 872 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 ARHGAP36Q6ZRI8 547 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 TP53INP2Q8IXH6 220 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 PAF1Q8N7H5 531 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 NETO2Q8NC67 525 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 ZBTB44Q8NCP5 570 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 PIP4K2CQ8TBX8 421 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 GAB3Q8WWW8 586 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 PBKQ96KB5 322 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 OLFM3Q96PB7 478 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 TUBGCP5Q96RT8 1024 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 NAP1L3Q99457 506 aaPredicted RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 TLR10Q9BXR5 811 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 FRMD8P1Q9BZ68 369 aaPredicted RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 PABPC3Q9H361 631 aaKnown RBP12.01□□□□□ -0.49
SNCA-202ENST00000345009 ATP13A3Q9H7F0 1226 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 RBM22Q9NW64 420 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNCA-202ENST00000345009 FBXL12Q9NXK8 326 aa12.01□□□□□ -0.49
SNCA-202ENST00000345009 CKAP5Q14008 2032 aa12□□□□□ -0.49
SNCA-202ENST00000345009 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12□□□□□ -0.49
SNCA-202ENST00000345009 KPNA3O00505 521 aaPredicted RBP12□□□□□ -0.49
SNCA-202ENST00000345009 ZNF821O75541 412 aaPredicted RBP12□□□□□ -0.49
SNCA-202ENST00000345009 LEFTY1O75610 366 aa12□□□□□ -0.49
SNCA-202ENST00000345009 RNASEH2AO75792 299 aaKnown RBP12□□□□□ -0.49
SNCA-202ENST00000345009 RHOBTB1O94844 696 aa12□□□□□ -0.49
SNCA-202ENST00000345009 MAP3K6O95382 1288 aa12□□□□□ -0.49
SNCA-202ENST00000345009 NFKBIAP25963 317 aa12□□□□□ -0.49
SNCA-202ENST00000345009 CD6P30203 668 aa12□□□□□ -0.49
SNCA-202ENST00000345009 SCNN1BP51168 640 aa12□□□□□ -0.49
SNCA-202ENST00000345009 TPMTP51580 245 aa12□□□□□ -0.49
SNCA-202ENST00000345009 AP1S1P61966 158 aa12□□□□□ -0.49
SNCA-202ENST00000345009 SLC10A7Q0GE19 358 aa12□□□□□ -0.49
SNCA-202ENST00000345009 TCF15Q12870 199 aa12□□□□□ -0.49
SNCA-202ENST00000345009 ELF2Q15723 593 aa12□□□□□ -0.49
SNCA-202ENST00000345009 ATXN7L2Q5T6C5 722 aaPredicted RBP12□□□□□ -0.49
SNCA-202ENST00000345009 NPNTQ6UXI9 565 aa12□□□□□ -0.49
SNCA-202ENST00000345009 SRLQ86TD4 932 aa12□□□□□ -0.49
SNCA-202ENST00000345009 ZC3H18Q86VM9 953 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms