RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 ALFQ53S48 1182 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 LGSNQ5TDP6 509 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 UNC5AQ6ZN44 842 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 CYS1Q717R9 158 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 LGI2Q8N0V4 545 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 C4orf33Q8N1A6 199 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 CNTD1Q8N815 330 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
CLK3-201ENST00000345005 HERVK_113Q902F9 699 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 PTCD3Q96EY7 689 aaKnown RBP13.02□□□□□ -0.33
CLK3-201ENST00000345005 FCRL5Q96RD9 977 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 FAM167BQ9BTA0 163 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 TSSK1BQ9BXA7 367 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 LRRC40Q9H9A6 602 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 GLOD4Q9HC38 313 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 NPHS2Q9NP85 383 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
CLK3-201ENST00000345005 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 TTLL3Q9Y4R7 772 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 DPPA5A6NC42 116 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 FOXO6A8MYZ6 492 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 MAP3K7O43318 606 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 ADH1AP07327 375 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 ESRRAP11474 423 aaPredicted RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 PRKCHP24723 683 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 NPY2RP49146 381 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 RENBPP51606 427 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 SESN2P58004 480 aaPredicted RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 HNRNPDQ14103 355 aaKnown RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 KBTBD12Q3ZCT8 623 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 PARP15Q460N3 678 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 CWF19L1Q69YN2 538 aaKnown RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 NAPEPLDQ6IQ20 393 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 CASC4Q6P4E1 433 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 CCDC149Q6ZUS6 474 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 LINC00523Q86TU6 105 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 KLHDC8BQ8IXV7 354 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 MPP5Q8N3R9 675 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLK3-201ENST00000345005 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 MRRFQ96E11 262 aaKnown RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 GORASP1Q9BQQ3 440 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 CASS4Q9NQ75 786 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 PAPOLBQ9NRJ5 636 aaKnown RBP13.01□□□□□ -0.33
CLK3-201ENST00000345005 RBM22Q9NW64 420 aaKnown RBP eCLIP13.01□□□□□ -0.339e-10■□□□□ 8.1
CLK3-201ENST00000345005 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 LZTS1Q9Y250 596 aa13.01□□□□□ -0.33
CLK3-201ENST00000345005 HGSO14964 777 aaPredicted RBP13□□□□□ -0.33
CLK3-201ENST00000345005 TGM5O43548 720 aa13□□□□□ -0.33
CLK3-201ENST00000345005 RAMP2O60895 175 aa13□□□□□ -0.33
CLK3-201ENST00000345005 SKAP2O75563 359 aaPredicted RBP13□□□□□ -0.33
CLK3-201ENST00000345005 STC2O76061 302 aa13□□□□□ -0.33
CLK3-201ENST00000345005 CBX6O95503 412 aa13□□□□□ -0.33
CLK3-201ENST00000345005 F11P03951 625 aa13□□□□□ -0.33
CLK3-201ENST00000345005 INHBAP08476 426 aa13□□□□□ -0.33
CLK3-201ENST00000345005 PGAM1P18669 254 aa13□□□□□ -0.33
CLK3-201ENST00000345005 MGAT1P26572 445 aa13□□□□□ -0.33
CLK3-201ENST00000345005 OR1E1P30953 314 aa13□□□□□ -0.33
CLK3-201ENST00000345005 RAP1GDS1P52306 607 aa13□□□□□ -0.33
CLK3-201ENST00000345005 POLD3Q15054 466 aaPredicted RBP13□□□□□ -0.33
CLK3-201ENST00000345005 RABGAP1LQ5R372 815 aa13□□□□□ -0.33
CLK3-201ENST00000345005 STEAP4Q687X5 459 aa13□□□□□ -0.33
CLK3-201ENST00000345005 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
CLK3-201ENST00000345005 OTOP3Q7RTS5 596 aa13□□□□□ -0.33
CLK3-201ENST00000345005 LRRC6Q86X45 466 aa13□□□□□ -0.33
CLK3-201ENST00000345005 DENND1CQ8IV53 801 aa13□□□□□ -0.33
CLK3-201ENST00000345005 GALNT15Q8N3T1 639 aa13□□□□□ -0.33
CLK3-201ENST00000345005 OR52K1Q8NGK4 314 aa13□□□□□ -0.33
CLK3-201ENST00000345005 RAB3IL1Q8TBN0 382 aa13□□□□□ -0.33
CLK3-201ENST00000345005 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
CLK3-201ENST00000345005 SLC44A1Q8WWI5 657 aa13□□□□□ -0.33
CLK3-201ENST00000345005 FAM136AQ96C01 138 aa13□□□□□ -0.33
CLK3-201ENST00000345005 HMCESQ96FZ2 354 aa13□□□□□ -0.33
CLK3-201ENST00000345005 SIKE1Q9BRV8 207 aa13□□□□□ -0.33
CLK3-201ENST00000345005 MLPHQ9BV36 600 aaPredicted RBP13□□□□□ -0.33
CLK3-201ENST00000345005 EMILIN2Q9BXX0 1053 aa13□□□□□ -0.33
CLK3-201ENST00000345005 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
CLK3-201ENST00000345005 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
CLK3-201ENST00000345005 RNF38Q9H0F5 515 aa13□□□□□ -0.33
CLK3-201ENST00000345005 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
CLK3-201ENST00000345005 BFARQ9NZS9 450 aa13□□□□□ -0.33
CLK3-201ENST00000345005 HEY2Q9UBP5 337 aa13□□□□□ -0.33
CLK3-201ENST00000345005 SORCS3Q9UPU3 1222 aa13□□□□□ -0.33
CLK3-201ENST00000345005 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 MAGEB16A2A368 324 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 C2orf78A6NCI8 922 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 TLL1O43897 1013 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 PSMG1O95456 288 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 LRG1P02750 347 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SPATA31D3P0C874 917 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 DHRS4L1P0CG22 281 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 GM2AP17900 193 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms