RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OCSTAMPQ9BR26 566 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 MMP27Q9H306 513 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GPATCH2Q9NW75 528 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF225Q9UK10 706 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 PRODHO43272 600 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ITM2AO43736 263 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CAMTA2O94983 1202 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 TXKP42681 527 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ARID5AQ03989 594 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 PCID2Q5JVF3 399 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SLC2A7Q6PXP3 512 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 KIAA1143Q96AT1 154 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SIPA1Q96FS4 1042 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 DOK1Q99704 481 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 H2AFY2Q9P0M6 372 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CRYL1Q9Y2S2 319 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 VIRMAQ69YN4 1812 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 PRAG1Q86YV5 1406 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 LOC390937A0A1W2PQ73 354 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 AIPO00170 330 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GTPBP6O43824 516 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CMPK1P30085 196 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GSTM5P46439 218 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 UBXN2BQ14CS0 331 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RFWD3Q6PCD5 774 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAM111BQ6SJ93 734 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GDPGP1Q6ZNW5 385 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RFX6Q8HWS3 928 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAM216AQ8WUB2 273 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RAD54LQ92698 747 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CCDC106Q9BWC9 280 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 DUSP22Q9NRW4 184 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RAB23Q9ULC3 237 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 MTF2Q9Y483 593 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 MBD5Q9P267 1494 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF487B1APH4 448 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAM155BO75949 473 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RSL1D1O76021 490 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 EEF1A1P68104 462 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 EEF1A2Q05639 463 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF844Q08AG5 666 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 TTLL12Q14166 644 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 EEF1A1P5Q5VTE0 462 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GPALPP1Q8IXQ4 340 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 OR2M2Q96R28 347 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF717Q9BY31 904 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 NYXQ9GZU5 481 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 OR10A4Q9H209 315 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GOLPH3Q9H4A6 298 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GPN2Q9H9Y4 310 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 STAP1Q9ULZ2 295 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 B2RBV5 119 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CDC7O00311 574 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 GUCA1CO95843 209 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SMIM6P0DI80 62 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CHN1P15882 459 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SHMT1P34896 483 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAM189A2Q15884 450 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 BTBD8Q5XKL5 378 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SLC25A24Q6NUK1 477 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RDM1Q8NG50 284 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RBM14Q96PK6 669 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CXXC1Q9P0U4 656 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ITGA11Q9UKX5 1188 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CLIC4Q9Y696 253 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RNF215Q9Y6U7 377 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAM95CA0A1B0GW59 222 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 PSMD3O43242 534 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 TSPAN19P0C672 248 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAAP100Q0VG06 881 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 COL13A1Q5TAT6 717 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 MRPL52Q86TS9 123 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ATCAYQ86WG3 371 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CLVS1Q8IUQ0 354 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 DEDD2Q8WXF8 326 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ATP5F1P24539 256 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 MYL6P60660 151 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM95Q3KNT9 176 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ELP5Q8TE02 316 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CLIC6Q96NY7 704 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 FAM207AQ9NSI2 230 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 IGSF5Q9NSI5 407 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RPH3AQ9Y2J0 694 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 H3BMM5 538 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 IPO13O94829 963 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 PSMG1O95456 288 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SERPINB5P36952 375 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 PSMD8P48556 350 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ALDH3A2P51648 485 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 DDX39BQ13838 428 aaKnown RBP3.8□□□□□ -1.8
SYNE2-202ENST00000344113 RESP18Q5W5W9 173 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ISLR2Q6UXK2 745 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 KCTD20Q7Z5Y7 419 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 CBWD2Q8IUF1 395 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 SLC24A4Q8NFF2 622 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 LRFN5Q96NI6 719 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 NACC1Q96RE7 527 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 NODALQ96S42 347 aa3.8□□□□□ -1.8
SYNE2-202ENST00000344113 ILKAPQ9H0C8 392 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms