RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 KLHL5Q96PQ7 755 aa19.61■□□□□ 0.73
COL9A3-201ENST00000343916 WDR55Q9H6Y2 383 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-201ENST00000343916 FAM95CA0A1B0GW59 222 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 TTC24A2A3L6 582 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-201ENST00000343916 J3KR12 359 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 NEMP1O14524 444 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 NVLO15381 856 aaKnown RBP19.6■□□□□ 0.73
COL9A3-201ENST00000343916 CIB2O75838 187 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 VHLP40337 213 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 NAGLUP54802 743 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 SREBF2Q12772 1141 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 SLC12A1Q13621 1099 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 MBTPS1Q14703 1052 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 AFMIDQ63HM1 303 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ZNF470Q6ECI4 717 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ZNF280DQ6N043 979 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 RANBP10Q6VN20 620 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 LRRC74BQ6ZQY2 392 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 NET1Q7Z628 596 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-201ENST00000343916 OMDQ99983 421 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 FAM96AQ9H5X1 160 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ENTPD7Q9NQZ7 604 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 NSMCE4AQ9NXX6 385 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 TMEM114B3SHH9 223 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 CNTN5O94779 1100 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 SKIP12755 728 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ALFQ53S48 1182 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 TIGD7Q6NT04 549 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ZYG11AQ6WRX3 759 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 CNTN4Q8IWV2 1026 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ATAD1Q8NBU5 361 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 LINC01599Q8WXQ3 324 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 NXNL1Q96CM4 212 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ANKRD27Q96NW4 1050 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 GMIPQ9P107 970 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 XPR1Q9UBH6 696 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
COL9A3-201ENST00000343916 DPPA5A6NC42 116 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 TMEM88BA6NKF7 163 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 CKBP12277 381 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ATP6V1C1P21283 382 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 HADHAP40939 763 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 WNT3AP56704 352 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ACTR3P61158 418 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ITKQ08881 620 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 EFEMP1Q12805 493 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 DLG1Q12959 904 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 PSMD5Q16401 504 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ARL13AQ5H913 290 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 POTEHQ6S545 545 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 FRMD7Q6ZUT3 714 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 NUP93Q8N1F7 819 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 SREK1Q8WXA9 508 aaKnown RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 SCG3Q8WXD2 468 aaKnown RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 HMCESQ96FZ2 354 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ZNF333Q96JL9 665 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 TSNARE1Q96NA8 513 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 NT5MQ9NPB1 228 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 TREX1Q9NSU2 369 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 HAPLN1P10915 354 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 EPHB1P54762 984 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 DSC1Q08554 894 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 TRMT5Q32P41 509 aaKnown RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 LIPMQ5VYY2 423 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 MON1AQ86VX9 555 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 COLGALT2Q8IYK4 626 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 EFCAB3Q8N7B9 438 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 PABPC5Q96DU9 382 aaKnown RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ILKAPQ9H0C8 392 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-201ENST00000343916 RGS18Q9NS28 235 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 TBC1D13Q9NVG8 400 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 TLR6Q9Y2C9 796 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ANKRD6Q9Y2G4 727 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ACOT9Q9Y305 439 aa19.59■□□□□ 0.73
COL9A3-201ENST00000343916 ARHGEF37A1IGU5 675 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 EME2A4GXA9 379 aaPredicted RBP19.58■□□□□ 0.73
COL9A3-201ENST00000343916 F8W8V4 182 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 PDE5AO76074 875 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 PIGNO95427 931 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 PEX11BO96011 259 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 MYL4P12829 197 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 STMN1P16949 149 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 HTR7P34969 479 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 RAB10P61026 200 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 SLC10A7Q0GE19 358 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 ZNF789Q5FWF6 425 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 MS4A13Q5J8X5 152 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 LRRC8EQ6NSJ5 796 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 ZNF354CQ86Y25 554 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 MIB1Q86YT6 1006 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 SGF29Q96ES7 293 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 SLC39A13Q96H72 371 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 ELMO2Q96JJ3 720 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 G3BP2Q9UN86 482 aaKnown RBP19.58■□□□□ 0.73
COL9A3-201ENST00000343916 SCML2Q9UQR0 700 aa19.58■□□□□ 0.73
COL9A3-201ENST00000343916 OAZ2O95190 189 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 EPHA3P29320 983 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 ARPP19P56211 112 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 TBX4P57082 545 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms