RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SEC13P55735 322 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TBL3Q12788 808 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 EIF2B5Q13144 721 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TRIP6Q15654 476 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 IL23RQ5VWK5 629 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 WDR59Q6PJI9 974 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 CHST9Q7L1S5 443 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 CROCCP3Q8IVE0 287 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 AHI1Q8N157 1196 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 LRRC8CQ8TDW0 803 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 RAB7BQ96AH8 199 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 CALML4Q96GE6 196 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TMEM176AQ96HP8 235 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ANKRD36BP1Q96IX9 119 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 PNMA5Q96PV4 448 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 SLITRK1Q96PX8 696 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 SMOC2Q9H3U7 446 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TLR8Q9NR97 1041 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 RASAL2Q9UJF2 1139 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 A0A1W2PQ67 120 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 A0A1W2PQF6 199 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ZSCAN5CA6NGD5 496 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 MEIS3P2A8K0S8 358 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 FBP2O00757 339 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ZW10O43264 779 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 GABRR2P28476 465 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 AFF3P51826 1226 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 NPEPPSP55786 919 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 EIF3BP55884 814 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TUBA4AP68366 448 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 COG7P83436 770 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 PON2Q15165 354 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 WDR72Q3MJ13 1102 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 MPPE1Q53F39 396 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 KIAA0895LQ68EN5 471 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 DSTYKQ6XUX3 929 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 B3GNT6Q6ZMB0 384 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 PASD1Q8IV76 773 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ESX1Q8N693 406 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 DGCR14Q96DF8 476 aaKnown RBP7.47□□□□□ -1.21
ZNF540-202ENST00000343599 CCDC42Q96M95 316 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 DEPDC7Q96QD5 511 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ETNK1Q9HBU6 452 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TRPC7Q9HCX4 862 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 STARD5Q9NSY2 213 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ZNHIT2Q9UHR6 403 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TFR2Q9UP52 801 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TSC22D4Q9Y3Q8 395 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 GRID2IPA4D2P6 1211 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 LRRIQ4A6NIV6 560 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 CDRT15L2A8MXV6 281 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 LACTBL1A8MY62 500 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 HUS1O60921 280 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 PDE5AO76074 875 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 FBXO45P0C2W1 286 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 MZF1P28698 734 aaPredicted RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 CCKBRP32239 447 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 TUBA1BP68363 451 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 PPP1R2P3Q6NXS1 205 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 LRRC8BQ6P9F7 803 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 TUBA1AQ71U36 451 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 DIS3L2Q8IYB7 885 aaKnown RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 ST13P4Q8IZP2 240 aaPredicted RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 GPD1LQ8N335 351 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 TMIEQ8NEW7 156 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 ISG20Q96AZ6 181 aaKnown RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 MCRS1Q96EZ8 462 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 CPB2Q96IY4 423 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 VPS50Q96JG6 964 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 ZSWIM3Q96MP5 696 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 KIFC3Q9BVG8 833 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 TARS2Q9BW92 718 aaKnown RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 PABPC3Q9H361 631 aaKnown RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 GKN1Q9NS71 199 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 NLGN3Q9NZ94 848 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 PRG3Q9Y2Y8 225 aaPredicted RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 PCDHGA3Q9Y5H0 932 aa7.46□□□□□ -1.21
ZNF540-202ENST00000343599 GPC6Q9Y625 555 aaPredicted RBP7.46□□□□□ -1.21
ZNF540-202ENST00000343599 TSPAN11A1L157 253 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 GOLGA8TH3BQL2 631 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 IFRD1O00458 451 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 TRAFD1O14545 582 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 KAT7O95251 611 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ENPP1P22413 925 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 CYLC1P35663 651 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 GRM2Q14416 872 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 HECTD3Q5T447 861 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 NAPEPLDQ6IQ20 393 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 TPH2Q8IWU9 490 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 STARD8Q92502 1023 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 FATE1Q969F0 183 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 PGM2Q96G03 612 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 FCRL4Q96PJ5 515 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ZNF184Q99676 751 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 ZPBPQ9BS86 351 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 TRIT1Q9H3H1 467 aaKnown RBP7.46□□□□□ -1.22
ZNF540-202ENST00000343599 COQ4Q9Y3A0 265 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 NOX1Q9Y5S8 564 aa7.46□□□□□ -1.22
ZNF540-202ENST00000343599 A0A088AWK7 358 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms