RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LY6G5CQ5SRR4 150 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 SYCE2Q6PIF2 218 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 CCNJLQ8IV13 435 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 APCDD1Q8J025 514 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 DCAF4L2Q8NA75 395 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 MRRFQ96E11 262 aaKnown RBP17.59■□□□□ 0.41
CLDN4-201ENST00000340958 SIGLEC10Q96LC7 697 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 CASS4Q9NQ75 786 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 VPS18Q9P253 973 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 CLEC4EQ9ULY5 219 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 NOTCH4Q99466 2003 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 HELZP42694 1942 aaKnown RBP17.59■□□□□ 0.41
CLDN4-201ENST00000340958 ATP9BO43861 1147 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 PAPLNO95428 1278 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 TYRP14679 529 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 TPH1P17752 444 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 WEE1P30291 646 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 STX2P32856 288 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 NPY2RP49146 381 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 SCNN1BP51168 640 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 WNT3AP56704 352 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 GEMIN4P57678 1058 aaKnown RBP17.58■□□□□ 0.41
CLDN4-201ENST00000340958 ARF5P84085 180 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 TNK2Q07912 1038 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 NIPAL4Q0D2K0 466 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 KLHL38Q2WGJ6 581 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 POTEHQ6S545 545 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 AGGF1Q8N302 714 aaeCLIP17.58■□□□□ 0.41
CLDN4-201ENST00000340958 PGBD5Q8N414 524 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 ZNF557Q8N988 423 aaPredicted RBP17.58■□□□□ 0.41
CLDN4-201ENST00000340958 BPIFB1Q8TDL5 484 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 IFT43Q96FT9 208 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 NAT9Q9BTE0 207 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 STMN4Q9H169 189 aaPredicted RBP17.58■□□□□ 0.41
CLDN4-201ENST00000340958 SCUBE2Q9NQ36 999 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 ABCB8Q9NUT2 735 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 THG1LQ9NWX6 298 aaKnown RBP17.58■□□□□ 0.41
CLDN4-201ENST00000340958 SYBUQ9NX95 663 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 VPS51Q9UID3 782 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 CD207Q9UJ71 328 aa17.58■□□□□ 0.41
CLDN4-201ENST00000340958 SERPINF2P08697 491 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 BMP1P13497 986 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 CD70P32970 193 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 PTCRAQ6ISU1 281 aaPredicted RBP17.58■□□□□ 0.4
CLDN4-201ENST00000340958 PRPF39Q86UA1 669 aaKnown RBP17.58■□□□□ 0.4
CLDN4-201ENST00000340958 SLC25A41Q8N5S1 370 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 SMRP1Q8NCR6 262 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 OSCP1Q8WVF1 389 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 ACDQ96AP0 544 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 EXOC2Q96KP1 924 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 ATP6V1G3Q96LB4 118 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 ASB16Q96NS5 453 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 PSKH2Q96QS6 385 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 XPO6Q96QU8 1125 aaKnown RBP17.58■□□□□ 0.4
CLDN4-201ENST00000340958 PPANQ9NQ55 473 aaKnown RBP17.58■□□□□ 0.4
CLDN4-201ENST00000340958 IKBKGQ9Y6K9 419 aa17.58■□□□□ 0.4
CLDN4-201ENST00000340958 HMGB1P1B2RPK0 211 aaPredicted RBP17.57■□□□□ 0.4
CLDN4-201ENST00000340958 TMCC1O94876 653 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 PENKP01210 267 aaPredicted RBP17.57■□□□□ 0.4
CLDN4-201ENST00000340958 GSTA2P09210 222 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 PGAM1P18669 254 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 RHOAP61586 193 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 SLC12A1Q13621 1099 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 TTMPQ5BVD1 217 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 CERCAMQ5T4B2 595 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 RNF135Q8IUD6 432 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 NAT16Q8N8M0 369 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 ST13P5Q8NFI4 369 aaPredicted RBP17.57■□□□□ 0.4
CLDN4-201ENST00000340958 MRGPRX2Q96LB1 330 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 CYTH2Q99418 400 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 TMEM109Q9BVC6 243 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 IL22Q9GZX6 179 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 OR51B4Q9Y5P0 310 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 C2orf16Q68DN1 1984 aa17.57■□□□□ 0.4
CLDN4-201ENST00000340958 MUSKO15146 869 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ADH1CP00326 375 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 POLBP06746 335 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 IL9P15248 144 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 GBP2P32456 591 aaPredicted RBP17.56■□□□□ 0.4
CLDN4-201ENST00000340958 CYTH1Q15438 398 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 PLEKHG6Q3KR16 790 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 TRIM68Q6AZZ1 485 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 UNC5AQ6ZN44 842 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 CTAGE3PQ8IX95 158 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 GSDMBQ8TAX9 411 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 RIPOR3Q96MK2 946 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 MGME1Q9BQP7 344 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ZFP14Q9HCL3 533 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 TBK1Q9UHD2 729 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 RABGEF1Q9UJ41 708 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 CDH7Q9ULB5 785 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 NOVA2Q9UNW9 492 aaKnown RBP17.56■□□□□ 0.4
CLDN4-201ENST00000340958 FCF1Q9Y324 198 aaKnown RBP17.56■□□□□ 0.4
CLDN4-201ENST00000340958 TTC28Q96AY4 2481 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 TCRBV9S1A1TA0A576 114 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 MAGEB16A2A368 324 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 HEPACAM2A8MVW5 462 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms