RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 FBXL19Q6PCT2 694 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 GLRX5Q86SX6 157 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 HORMAD1Q86X24 394 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 NIPA2Q8N8Q9 360 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 FAM174AQ8TBP5 190 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARRDC3Q96B67 414 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARHGEF26Q96DR7 871 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 CDC6Q99741 560 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 MAGEB5Q9BZ81 275 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 DHX35Q9H5Z1 703 aaKnown RBP13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 NOL6Q9H6R4 1146 aaKnown RBP13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 LRRC19Q9H756 370 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 ZWILCHQ9H900 591 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 ERVMER34-1Q9H9K5 563 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 EBF2Q9HAK2 575 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARHGAP20Q9P2F6 1191 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 MYO1AQ9UBC5 1043 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 PLXNA2O75051 1894 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 A0A087X0T9 212 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 A0A1W2PR77 199 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARHGAP42A6NI28 874 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 TLR4O00206 839 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 PLK4O00444 970 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 DAPK3O43293 454 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 SH3BP5O60239 455 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 TMCC1O94876 653 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 IGSF6O95976 241 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 FAM228BP0C875 321 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ADRB3P13945 408 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARRB1P49407 418 aaPredicted RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 RPS21P63220 83 aaKnown RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 SIM1P81133 766 aaPredicted RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 STAT4Q14765 748 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 GRM3Q14832 879 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 TRIP6Q15654 476 aaKnown RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 MYLK3Q32MK0 819 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ZNF805Q5CZA5 627 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ALKBH5Q6P6C2 394 aaKnown RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 RFX8Q6ZV50 586 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 RYBPQ8N488 228 aaPredicted RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 LZTR1Q8N653 840 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ELF4Q99607 663 aaPredicted RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 TM6SF2Q9BZW4 377 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ZDHHC6Q9H6R6 413 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 IL21RQ9HBE5 538 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 IP6K2Q9UHH9 426 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCOLCE2Q9UKZ9 415 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 MFHAS1Q9Y4C4 1052 aa13.55□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 A0A1W2PQU0 124 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 TSPAN6O43657 245 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 CBFA2T3O75081 653 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 CYP1A2P05177 515 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 AKT2P31751 481 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 GRK6P43250 576 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 SUOXP51687 545 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 NXPH1P58417 271 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 RHOAP61586 193 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 PPP6R3Q5H9R7 873 aaPredicted RBP13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 CYP4V2Q6ZWL3 525 aaPredicted RBP13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 DNAAF5Q86Y56 855 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 OR8K1Q8NGG5 319 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 HCAR2Q8TDS4 363 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 SETD7Q8WTS6 366 aaKnown RBP13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 TEKT4Q8WW24 435 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 FEM1CQ96JP0 617 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 DNAJC7Q99615 494 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 THAP2Q9H0W7 228 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 UBA2Q9UBT2 640 aaPredicted RBP13.54□□□□□ -0.24
SIRPB3P-201ENST00000340424 A0A1B0GTQ1 180 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 C16orf96A6NNT2 1141 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 H0Y8X5 98 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 H3BRJ5 948 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 MYO1FO00160 1098 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 KRIT1O00522 736 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 PRAMEF11O60813 436 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCDH8O95206 1070 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 WNT1P04628 370 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 HNRNPA2B1P22626 353 aaKnown RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 MAT2AP31153 395 aaKnown RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARL4AP40617 200 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 DPYSQ14117 519 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 RFTN1Q14699 578 aaPredicted RBP13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 SLC18A3Q16572 532 aa13.53□□□□□ -0.24
SIRPB3P-201ENST00000340424 CA9Q16790 459 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms