RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 AP1G1O43747 822 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TPST1O60507 370 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TNFAIP8O95379 198 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 GNAO1P09471 354 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 MATKP42679 507 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 GJA8P48165 433 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 XIAPP98170 497 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 SOX4Q06945 474 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZNF410Q86VK4 478 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 NUP93Q8N1F7 819 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TSPAN18Q96SJ8 248 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 RHOBTB2Q9BYZ6 727 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZBTB26Q9HCK0 441 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 FBRSL1Q9HCM7 1045 aaKnown RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TRPC7Q9HCX4 862 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 EPS15L1Q9UBC2 864 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 RAP2CQ9Y3L5 183 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 CITO14578 2027 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 DNAJC25-GNG10A0A024R161 153 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 CCL22O00626 93 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TIPRLO75663 272 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 AP2A1O95782 977 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 JCHAINP01591 159 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 CDH2P19022 906 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 GNL1P36915 607 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 CXCR3P49682 368 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 NDST2P52849 883 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 C1QTNF8P60827 252 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 POU5F1BQ06416 359 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 APOFQ13790 326 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZNF789Q5FWF6 425 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 LIPMQ5VYY2 423 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 PSTKQ8IV42 348 aaKnown RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 RNF168Q8IYW5 571 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 DRC3Q9H069 523 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 NOL11Q9H8H0 719 aaKnown RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 TIMM13Q9Y5L4 95 aaPredicted RBP12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 PTGDR2Q9Y5Y4 395 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 CEPT1Q9Y6K0 416 aa12.11□□□□□ -0.47
CCDC144CP-201ENST00000340196 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PRORSD1PA6NEY8 169 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 GAS2O43903 313 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SEC24DO94855 1032 aaPredicted RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 TFPTP0C1Z6 253 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 YWHAQP27348 245 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 HOXA11P31270 313 aaPredicted RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 GLUD2P49448 558 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 BCAT1P54687 386 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 TNFAIP2Q03169 654 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 BTG3Q14201 252 aaPredicted RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZC3HC1Q86WB0 502 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 PGAM4Q8N0Y7 254 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SHCBP1Q8NEM2 672 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 RP9Q8TA86 221 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SH3RF2Q8TEC5 729 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 GAB3Q8WWW8 586 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SLCO4A1Q96BD0 722 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SERPINI1Q99574 410 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 OSMRQ99650 979 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 MROH8Q9H579 483 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZNF385DQ9H6B1 395 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 ZNF839A8K0R7 811 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 DCLK1O15075 740 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 BCAS2O75934 225 aaPredicted RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 RECQL4O94761 1208 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CCDC166P0CW27 439 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CHRNA4P43681 627 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 EMP3P54852 163 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 MAP3K7CLP57077 242 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CTBSQ01459 385 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 DPYSQ14117 519 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 SLC25A52Q3SY17 297 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CLEC6AQ6EIG7 209 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 KDM1BQ8NB78 822 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CCT7Q99832 543 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CORO1BQ9BR76 489 aa12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 MRPS26Q9BYN8 205 aaKnown RBP12.1□□□□□ -0.47
CCDC144CP-201ENST00000340196 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms