RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 COL4A6Q14031 1691 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 KRT16P08779 473 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 SPRP35270 261 aaPredicted RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 ARCN1P48444 511 aaKnown RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 RENBPP51606 427 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 ARFIP2P53365 341 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 TWF1Q12792 350 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 SERINC3Q13530 473 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 RAPH1Q70E73 1250 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 LINC00523Q86TU6 105 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 SH3RF2Q8TEC5 729 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 IMP4Q96G21 291 aaKnown RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 YIPF1Q9Y548 306 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 TANC1Q9C0D5 1861 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 DRGXA6NNA5 263 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 F5H5T6 163 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 RASSF9O75901 435 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 HAUS5O94927 633 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 FGF3P11487 239 aaPredicted RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 CORO1AP31146 461 aaKnown RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 HNRNPH1P31943 449 aaKnown RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 SLC1A2P43004 574 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 PSEN1P49768 467 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 ARSDP51689 593 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 NDST2P52849 883 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 ITGA9Q13797 1035 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 IL31Q6EBC2 164 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 CEP97Q8IW35 865 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 ARRDC2Q8TBH0 407 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 SLC25A51Q9H1U9 297 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 PPARGC1AQ9UBK2 798 aaKnown RBP15.65■□□□□ 0.1
MBD1-203ENST00000339998 TCAF1Q9Y4C2 921 aa15.65■□□□□ 0.1
MBD1-203ENST00000339998 EYSQ5T1H1 3165 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 TK2O00142 265 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 ACSL4O60488 711 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 SLC4A1P02730 911 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 PROCP04070 461 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 GJA1P17302 382 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 OCRLQ01968 901 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 ZNF33AQ06730 810 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 EML3Q32P44 896 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 ZNF470Q6ECI4 717 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 LINGO4Q6UY18 593 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 PTAR1Q7Z6K3 402 aaPredicted RBP15.64■□□□□ 0.09
MBD1-203ENST00000339998 ZC3HC1Q86WB0 502 aaKnown RBP15.64■□□□□ 0.09
MBD1-203ENST00000339998 RNF168Q8IYW5 571 aaPredicted RBP15.64■□□□□ 0.09
MBD1-203ENST00000339998 CNPY4Q8N129 248 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 FAM136AQ96C01 138 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 SAGE1Q9NXZ1 904 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 PRRG1O14668 218 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 STC2O76061 302 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 CNTFP26441 200 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 USP10Q14694 798 aaKnown RBP15.64■□□□□ 0.09
MBD1-203ENST00000339998 SETDB1Q15047 1291 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 HECTD3Q5T447 861 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 MBLAC2Q68D91 279 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 CYB5D1Q6P9G0 228 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 CNSTQ6PJW8 725 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 TTLL2Q9BWV7 592 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 SHCBP1LQ9BZQ2 653 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 ZFP69BQ9UJL9 534 aa15.64■□□□□ 0.09
MBD1-203ENST00000339998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 GLRA3O75311 464 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 DNAJC8O75937 253 aaPredicted RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 SOD2P04179 222 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 PRSS56P0CW18 603 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 HTR7P34969 479 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 AQP5P55064 265 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 STX3Q13277 289 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 LBRQ14739 615 aaKnown RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 ANO4Q32M45 955 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 SIRPB2Q5JXA9 342 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 RBM20Q5T481 1227 aaKnown RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 TXNDC8Q6A555 127 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 CNKSR3Q6P9H4 555 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 NAPRTQ6XQN6 538 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 GPATCH11Q8N954 259 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 PPHLN1Q8NEY8 458 aaKnown RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 KCTD4Q8WVF5 259 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 ZNF334Q9HCZ1 680 aaPredicted RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 ENTPD7Q9NQZ7 604 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 PNPOQ9NVS9 261 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 MAGEB16A2A368 324 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 TUFMP49411 452 aaKnown RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 HARS2P49590 506 aaKnown RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 VWA5B1Q5TIE3 1220 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 DNAJB7Q7Z6W7 309 aaPredicted RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 CLNKQ7Z7G1 428 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 TMEM150AQ86TG1 271 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 KLHDC8BQ8IXV7 354 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 MCMBPQ9BTE3 642 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 MKS1Q9NXB0 559 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 AFF4Q9UHB7 1163 aaKnown RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 ABLIM3O94929 683 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 CLTBP09497 229 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 HOXD9P28356 352 aaPredicted RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 CPA2P48052 419 aa15.63■□□□□ 0.09
MBD1-203ENST00000339998 ELF3P78545 371 aaPredicted RBP15.63■□□□□ 0.09
MBD1-203ENST00000339998 ZBTB16Q05516 673 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms