RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 TM6SF2Q9BZW4 377 aa18.14■□□□□ 0.49
SDCBP2-201ENST00000339987 TNKS2Q9H2K2 1166 aa18.14■□□□□ 0.49
SDCBP2-201ENST00000339987 CACNA2D2Q9NY47 1150 aa18.14■□□□□ 0.49
SDCBP2-201ENST00000339987 RSPH14Q9UHP6 348 aa18.14■□□□□ 0.49
SDCBP2-201ENST00000339987 TTLL3Q9Y4R7 772 aa18.14■□□□□ 0.49
SDCBP2-201ENST00000339987 VCANP13611 3396 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 FAM170BA6NMN3 283 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 FDFT1P37268 417 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 MAPK8P45983 427 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 RECQLP46063 649 aaPredicted RBP18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 AP1S1P61966 158 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 DSC2Q02487 901 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 ITKQ08881 620 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 FZD5Q13467 585 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 ATXN7L2Q5T6C5 722 aaPredicted RBP18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 SDE2Q6IQ49 451 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 SRLQ86TD4 932 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 LRRN4CLQ8ND94 238 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 IMP4Q96G21 291 aaKnown RBP18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 EXOC2Q96KP1 924 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 SEMA3CQ99985 751 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 FOXQ1Q9C009 403 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 LMAN1LQ9HAT1 526 aa18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 MTF2Q9Y483 593 aaPredicted RBP18.13■□□□□ 0.49
SDCBP2-201ENST00000339987 MYO18AQ92614 2054 aaKnown RBP18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 CHURC1-FNTBB4DL54 471 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 WASH3PC4AMC7 463 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 INSIG1O15503 277 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 METTL18O95568 372 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 KLF8O95600 359 aaPredicted RBP18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 HLA-EP13747 358 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 PSMB4P28070 264 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 TUBB4BP68371 445 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 NIPAL4Q0D2K0 466 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 TRIP13Q15645 432 aaPredicted RBP18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 FAM182AQ5T1J6 154 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 C9orf64Q5T6V5 341 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 KLHDC8BQ8IXV7 354 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 TADA1Q96BN2 335 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 LRRC1Q9BTT6 524 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 ZDHHC4Q9NPG8 344 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 SCUBE2Q9NQ36 999 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 ASIC3Q9UHC3 531 aa18.12■□□□□ 0.49
SDCBP2-201ENST00000339987 RIOK3O14730 519 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 ALOX15BO15296 676 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 ADAM23O75077 832 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 SIN3BO75182 1162 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 ANXA9O76027 345 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 POP4O95707 220 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 EPHX1P07099 455 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 MMP2P08253 660 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 ALADP13716 330 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 SCNN1BP51168 640 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 CCNHP51946 323 aaPredicted RBP18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 RAD51Q06609 339 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 GPS1Q13098 491 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 CAMK2GQ13555 558 aaPredicted RBP18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 PRPSAP1Q14558 356 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 GRM3Q14832 879 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 MYLK3Q32MK0 819 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 EOGTQ5NDL2 527 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 CCDC70Q6NSX1 233 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 NCEH1Q6PIU2 408 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 DPY19L3Q6ZPD9 716 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 TRIM67Q6ZTA4 783 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 ZNF366Q8N895 744 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 TXNDC5Q8NBS9 432 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 PJA1Q8NG27 643 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 RPLP0P6Q8NHW5 317 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 CLDN23Q96B33 292 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 LRRC45Q96CN5 670 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 TUBGCP5Q96RT8 1024 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 GORASP1Q9BQQ3 440 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 ERP44Q9BS26 406 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 TRIM51Q9BSJ1 452 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 RAB17Q9H0T7 212 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 MTG2Q9H4K7 406 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 NOD2Q9HC29 1040 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 PRSS16Q9NQE7 514 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 RAB6BQ9NRW1 208 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 VPS45Q9NRW7 570 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 MMP17Q9ULZ9 603 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 FARP1Q9Y4F1 1045 aaPredicted RBP18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 CKAP5Q14008 2032 aa18.11■□□□□ 0.49
SDCBP2-201ENST00000339987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 SERPINF2P08697 491 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 WASP42768 502 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 VPS41P49754 854 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 GEMP55040 296 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 MRPS25P82663 173 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 SKOR1P84550 965 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 SEMA5AQ13591 1074 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 ELAVL3Q14576 367 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 PRPF39Q86UA1 669 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 OXNAD1Q96HP4 312 aaPredicted RBP18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 LRIG1Q96JA1 1093 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 HEPHQ9BQS7 1158 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 CPEB1Q9BZB8 566 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 FBRSQ9HAH7 460 aa18.1■□□□□ 0.49
SDCBP2-201ENST00000339987 ETNK1Q9HBU6 452 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms