RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NDNQ99608 321 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CDH13P55290 713 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SLC34A1Q06495 639 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 NFYCQ13952 458 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 DPY19L2P1Q6NXN4 242 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 C10orf107Q8IVU9 208 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PQLC3Q8N755 202 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PEBP4Q96S96 227 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TSC22D3Q99576 134 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PLIN3O60664 434 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 ATP5F1P24539 256 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TBL3Q12788 808 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 STXBP5Q5T5C0 1151 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 RELL1Q8IUW5 271 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SH3KBP1Q96B97 665 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 GABRQQ9UN88 632 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 LAMB4A4D0S4 1761 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TGDSO95455 350 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 AMHP03971 560 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 LTA4HP09960 611 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SKIV2L2P42285 1042 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF284Q2VY69 593 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 AGAP11Q8TF27 550 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 NPY6RQ99463 290 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 VPS45Q9NRW7 570 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 FMO4P31512 558 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 GALNT3Q14435 633 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 KPNB1Q14974 876 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 PPP1R15BQ5SWA1 713 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 BANPQ8N9N5 519 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM40Q8WWA1 233 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RMDN2Q96LZ7 410 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 FOPNLQ96NB1 174 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ADAMTS10Q9H324 1103 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ASB8Q9H765 288 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 VWA7Q9Y334 891 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 USP1O94782 785 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ESRP1Q6NXG1 681 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 MIOSQ9NXC5 875 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RBBP8Q99708 897 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC167Q9P0B6 97 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RBM47A0AV96 593 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RASAL3Q86YV0 1011 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 LRRC43Q8N309 656 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TRIB2Q92519 343 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CAPNS2Q96L46 248 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC134Q9H6E4 229 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 E9PAM4 449 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 GRIA4P48058 902 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 GJA9P57773 515 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 DLG2Q15700 870 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TBATAQ96M53 351 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ACOX2Q99424 681 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SLC39A8Q9C0K1 460 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 MID1IP1Q9NPA3 183 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 COPG2Q9UBF2 871 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RP1L1Q8IWN7 2480 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 A8MX80 341 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CXorf49A8MYA2 514 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CLDN11O75508 207 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SEC24DO94855 1032 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF252P-AS1Q0IIN9 211 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 PTPRNQ16849 979 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RFWD3Q6PCD5 774 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RNF168Q8IYW5 571 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 MPP5Q8N3R9 675 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 METTL6Q8TCB7 284 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 EMID1Q96A84 441 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 MS4A4AQ96JQ5 239 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ASB2Q96Q27 587 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CENPKQ9BS16 269 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM216Q9P0N5 145 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SLC25A13Q9UJS0 675 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 PDE5AO76074 875 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM154Q6P9G4 183 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ALYREFQ86V81 257 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SPATA6LQ8N4H0 392 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SNX31Q8N9S9 440 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 AGO1Q9UL18 857 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SNX10Q9Y5X0 201 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ENTPD5O75356 428 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 IGSF6O95976 241 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TKTP29401 623 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SERPINA4P29622 427 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 DDX39BQ13838 428 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 MSS51Q4VC12 460 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 EMC10Q5UCC4 262 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 RTL3Q8N8U3 475 aaKnown RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SUSD3Q96L08 255 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ING2Q9H160 280 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 CATSPERZQ9NTU4 200 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF358Q9NW07 568 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TRAFD1O14545 582 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 INHAP05111 366 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TSPAN8P19075 237 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 WEE1P30291 646 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 FAM13CQ8NE31 585 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SIGLEC10Q96LC7 697 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms