RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 IKBKGQ9Y6K9 419 aa15.68■□□□□ 0.1
LIMS1-202ENST00000338045 FAM169AQ9Y6X4 670 aa15.68■□□□□ 0.1
LIMS1-202ENST00000338045 IQANK1A0A1B0GTG1 560 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CD160O95971 181 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 BRAFP15056 766 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CR2P20023 1033 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MZF1P28698 734 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 GNGT1P63211 74 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CDH18Q13634 790 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 PCID2Q5JVF3 399 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 PPP2R2DQ66LE6 453 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 UNC5BQ8IZJ1 945 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 DCAF4L2Q8NA75 395 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MDM1Q8TC05 714 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 DDI1Q8WTU0 396 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CENPTQ96BT3 561 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 SEMA3CQ99985 751 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MSRAQ9UJ68 235 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 LAMA3Q16787 3333 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 LOC285095A0A1B0GVY8 99 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 TMEM120BA0PK00 339 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CBX4O00257 560 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 FAM155BO75949 473 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 PRAMEF12O95522 483 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 EPOP01588 193 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CHN1P15882 459 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 NUMBP49757 651 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MGAT5Q09328 741 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MSLNQ13421 630 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CYTH1Q15438 398 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 ZNF77Q15935 545 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 FYB2Q5VWT5 728 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CES3Q6UWW8 571 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MFN1Q8IWA4 741 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 TTC16Q8NEE8 873 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CDKL2Q92772 493 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 ZNF669Q96BR6 464 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MFSD3Q96ES6 412 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CERS2Q96G23 380 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CINPQ9BW66 212 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 TRABDQ9H4I3 376 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 MRM3Q9HC36 420 aaKnown RBP15.67■□□□□ 0.1
LIMS1-202ENST00000338045 CHRAC1Q9NRG0 131 aa15.67■□□□□ 0.1
LIMS1-202ENST00000338045 A0A1W2PPM1 405 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 SNAP91O60641 907 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 CSKP41240 450 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 CHRNA4P43681 627 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 SLC18A1P54219 525 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 USP4Q13107 963 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 PCSK7Q16549 785 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 INO80DQ53TQ3 878 aaPredicted RBP15.66■□□□□ 0.1
LIMS1-202ENST00000338045 TTC19Q6DKK2 380 aaPredicted RBP15.66■□□□□ 0.1
LIMS1-202ENST00000338045 PKN3Q6P5Z2 889 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 FIBINQ8TAL6 211 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 GDPD5Q8WTR4 605 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 ZSWIM3Q96MP5 696 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 SSU72Q9NP77 194 aaKnown RBP15.66■□□□□ 0.1
LIMS1-202ENST00000338045 PRKAG3Q9UGI9 489 aa15.66■□□□□ 0.1
LIMS1-202ENST00000338045 TTC24A2A3L6 582 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 EPOPA6NHQ4 379 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 CCDC85CA6NKD9 419 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 SRRM3A6NNA2 597 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 PRPF4O43172 522 aaKnown RBP eCLIP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 UGT1A9O60656 530 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 GJB3O75712 270 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 CEBPBP17676 345 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 CES1P23141 567 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 LSP1P33241 339 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 RGRP47804 291 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 NRIP1P48552 1158 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 MPP2Q14168 576 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 SLC1A5Q15758 541 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 VN1R2Q8NFZ6 395 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 ATXN2LQ8WWM7 1075 aaKnown RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 SMG7Q92540 1137 aaKnown RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 FEM1CQ96JP0 617 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 LMLNQ96KR4 655 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 RANBP9Q96S59 729 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 CDCA3Q99618 268 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 UGT1A7Q9HAW7 530 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 UGT1A10Q9HAW8 530 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 UGT1A8Q9HAW9 530 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 VPS51Q9UID3 782 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 VPS28Q9UK41 221 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 MRPS23Q9Y3D9 190 aaKnown RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 TCAF1Q9Y4C2 921 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 CEP290O15078 2479 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 TRANK1O15050 2925 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 CYBBP04839 570 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 SERPINF2P08697 491 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 ATXN1LP0C7T5 689 aaKnown RBP15.65■□□□□ 0.1
LIMS1-202ENST00000338045 ADRA1DP25100 572 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 NMBRP28336 390 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 WEE1P30291 646 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 SERPINB9P50453 376 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 POU6F1Q14863 301 aa15.65■□□□□ 0.1
LIMS1-202ENST00000338045 LGSNQ5TDP6 509 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms