RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KANSL1Q7Z3B3 1105 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 PTAR1Q7Z6K3 402 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 SLFN11Q7Z7L1 901 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 SLC25A45Q8N413 288 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 OR13H1Q8NG92 308 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 GPT2Q8TD30 523 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 FAM172AQ8WUF8 416 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ARHGEF2Q92974 986 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 RAB7BQ96AH8 199 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 TBC1D31Q96DN5 1066 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ARHGEF26Q96DR7 871 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 IFT43Q96FT9 208 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 OSBPL1AQ9BXW6 950 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 TM6SF2Q9BZW4 377 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 NRSN2Q9GZP1 204 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ABCG4Q9H172 646 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 GANQ9H2C0 597 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 DNAJC28Q9NX36 388 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 CLCA2Q9UQC9 943 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 FCF1Q9Y324 198 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 WASF2Q9Y6W5 498 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 TDRD6O60522 2096 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ZSCAN5CA6NGD5 496 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-202ENST00000337571 C2CD4BA6NLJ0 364 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 GOLGA6L22H0YM25 854 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 H3BM21 787 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 BUB1O43683 1085 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 KDELR3O43731 214 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 AP1G1O43747 822 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 CALB1P05937 261 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 CHRNB2P17787 502 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 GPD1P21695 349 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 RFC1P35251 1148 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-202ENST00000337571 RABIFP47224 123 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 KLK7P49862 253 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 JAM2P57087 298 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 FMO1Q01740 532 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 MYLK3Q32MK0 819 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF805Q5CZA5 627 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 CDKAL1Q5VV42 579 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 TMC6Q7Z403 805 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 ABI3BPQ7Z7G0 1075 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 TTC7BQ86TV6 843 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 OR4C6Q8NH72 309 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 JOSD2Q8TAC2 188 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 BAP1Q92560 729 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 GBP4Q96PP9 640 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 DUSP23Q9BVJ7 150 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 LMBRD1Q9NUN5 540 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 ANO10Q9NW15 660 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 TMEM248Q9NWD8 314 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 ZFR2Q9UPR6 939 aaKnown RBP10.84□□□□□ -0.67
CAPN3-202ENST00000337571 FADS3Q9Y5Q0 445 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
CAPN3-202ENST00000337571 MYLKQ15746 1914 aa10.84□□□□□ -0.67
CAPN3-202ENST00000337571 PKD1L2Q7Z442 2459 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 A0A087WV48 116 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 IGLON5A6NGN9 336 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 SIGLEC16A6NMB1 481 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 C16orf96A6NNT2 1141 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 FAM72CH0Y354 149 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 RNF103O00237 685 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 TRIM38O00635 465 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 SCAMP1O15126 338 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 PIAS2O75928 621 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 LRIG2O94898 1065 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 GSRP00390 522 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 UNGP13051 313 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 XPAP23025 273 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 EPHB2P29323 1055 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 ACTN2P35609 894 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 COPB1P53618 953 aaKnown RBP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 CLDN6P56747 220 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 LSM11P83369 360 aaKnown RBP eCLIP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 COL9A2Q14055 689 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 PTK2BQ14289 1009 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 RTP5Q14D33 572 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 CLEC16AQ2KHT3 1053 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 ZNF542PQ5EBM4 170 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 FAM72AQ5TYM5 149 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 FAM72DQ6L9T8 149 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 WDR59Q6PJI9 974 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 GCNT7Q6ZNI0 430 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 FAM72BQ86X60 149 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 OR2AP1Q8NGE2 309 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 OR6K2Q8NGY2 324 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 CASKIN2Q8WXE0 1202 aa10.83□□□□□ -0.68
CAPN3-202ENST00000337571 CENPIQ92674 756 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-202ENST00000337571 BMFQ96LC9 184 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms