RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 NYNRINQ9P2P1 1898 aaKnown RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 MSX2P35548 267 aaPredicted RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 RAB27AP51159 221 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 WNT3AP56704 352 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 TAS2R39P59534 338 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 SLC10A7Q0GE19 358 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 PDCD2Q16342 344 aaPredicted RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 DBN1Q16643 649 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 IL31Q6EBC2 164 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 EPGNQ6UW88 154 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 SH3TC2Q8TF17 1288 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 DSEQ9UL01 958 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 ANXA9O76027 345 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 ARCN1P48444 511 aaKnown RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 IHHQ14623 411 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 CLLU1OSQ5K130 101 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 C6orf163Q5TEZ5 329 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 MANEALQ5VSG8 457 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 HMCESQ96FZ2 354 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 TSGA13Q96PP4 275 aa19.17■□□□□ 0.66
RFTN1-201ENST00000334133 LENG8Q96PV6 779 aaPredicted RBP19.17■□□□□ 0.66
RFTN1-201ENST00000334133 AIM2O14862 343 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 ANPEPP15144 967 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 PBX3P40426 434 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 CD86P42081 329 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 PLK1P53350 603 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 ACTR3P61158 418 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 BRMS1LQ5PSV4 323 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 TMC7Q7Z402 723 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 NET1Q7Z628 596 aaPredicted RBP19.16■□□□□ 0.66
RFTN1-201ENST00000334133 ILKAPQ9H0C8 392 aaPredicted RBP19.16■□□□□ 0.66
RFTN1-201ENST00000334133 TCF7L2Q9NQB0 619 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 ACOT9Q9Y305 439 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 TCAF1Q9Y4C2 921 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 DLX3O60479 287 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 PAX7P23759 505 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 DSC2Q02487 901 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 MAPRE1Q15691 268 aaKnown RBP19.16■□□□□ 0.66
RFTN1-201ENST00000334133 TBCCQ15814 346 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 RTL3Q8N8U3 475 aaKnown RBP19.16■□□□□ 0.66
RFTN1-201ENST00000334133 SLC26A7Q8TE54 656 aa19.16■□□□□ 0.66
RFTN1-201ENST00000334133 FCGRTP55899 365 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 LRRC8EQ6NSJ5 796 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 GLB1LQ6UWU2 654 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 PTAR1Q7Z6K3 402 aaPredicted RBP19.15■□□□□ 0.66
RFTN1-201ENST00000334133 RPAINQ86UA6 219 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 PSMG2Q969U7 264 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 FAM136AQ96C01 138 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 OR51F1A6NGY5 319 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 CACNG3O60359 315 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 HNRNPLP14866 589 aaKnown RBP eCLIP19.15■□□□□ 0.66
RFTN1-201ENST00000334133 STMN1P16949 149 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 ITGAXP20702 1163 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 ATXN3P54252 364 aaPredicted RBP19.15■□□□□ 0.66
RFTN1-201ENST00000334133 GEMP55040 296 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 MLLT6P55198 1093 aaPredicted RBP19.15■□□□□ 0.66
RFTN1-201ENST00000334133 KLF10Q13118 480 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 SLC12A1Q13621 1099 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 CSHL1Q14406 222 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 MBTPS1Q14703 1052 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 PTPRCAPQ14761 206 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 ZYG11AQ6WRX3 759 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 ZNF598Q86UK7 904 aaKnown RBP19.15■□□□□ 0.66
RFTN1-201ENST00000334133 KLHDC9Q8NEP7 349 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 CATSPER2Q96P56 530 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 SIKE1Q9BRV8 207 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 GEMIN8Q9NWZ8 242 aaKnown RBP19.15■□□□□ 0.66
RFTN1-201ENST00000334133 KCTD3Q9Y597 815 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 NLRC5Q86WI3 1866 aa19.15■□□□□ 0.66
RFTN1-201ENST00000334133 KCNU1A8MYU2 1149 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 CAPN15O75808 1086 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 COX4I1P13073 169 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 ALOX15P16050 662 aaPredicted RBP19.14■□□□□ 0.66
RFTN1-201ENST00000334133 ADRA1AP35348 466 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 GATMP50440 423 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 RAB10P61026 200 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 TRMT5Q32P41 509 aaKnown RBP19.14■□□□□ 0.66
RFTN1-201ENST00000334133 LSM12Q3MHD2 195 aaKnown RBP19.14■□□□□ 0.66
RFTN1-201ENST00000334133 LIPMQ5VYY2 423 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 RAP1GAP2Q684P5 730 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 UPF3AQ9H1J1 476 aaKnown RBP19.14■□□□□ 0.66
RFTN1-201ENST00000334133 SUDS3Q9H7L9 328 aaPredicted RBP19.14■□□□□ 0.66
RFTN1-201ENST00000334133 FBXO5Q9UKT4 447 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 SSX2IPQ9Y2D8 614 aa19.14■□□□□ 0.66
RFTN1-201ENST00000334133 FGF10O15520 208 aaPredicted RBP19.14■□□□□ 0.65
RFTN1-201ENST00000334133 TFEBP19484 476 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 RANBP10Q6VN20 620 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 RNF148Q8N7C7 305 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 SH3RF2Q8TEC5 729 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 HEXDCQ8WVB3 486 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 SREK1Q8WXA9 508 aaKnown RBP19.14■□□□□ 0.65
RFTN1-201ENST00000334133 PIRTP0C851 137 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 CYP2C18P33260 490 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 ZNF135P52742 658 aaPredicted RBP19.14■□□□□ 0.65
RFTN1-201ENST00000334133 TBX4P57082 545 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 BLMHQ13867 455 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 IGSF8Q969P0 613 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 MYEOVQ96EZ4 313 aa19.14■□□□□ 0.65
RFTN1-201ENST00000334133 ABT1Q9ULW3 272 aaKnown RBP19.14■□□□□ 0.65
RFTN1-201ENST00000334133 ACTL7AQ9Y615 435 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms