RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ZNF839A8K0R7 811 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 GRAP2O75791 330 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 KRT75O95678 551 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 CLIC3O95833 236 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 ITGBL1O95965 494 aaPredicted RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 CHEK2O96017 543 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 ERBB2P04626 1255 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 GABRB3P28472 473 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 RPL14P50914 215 aaKnown RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 LRP8Q14114 963 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 XYLT1Q86Y38 959 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 TMEM130Q8N3G9 435 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 SEPT1Q8WYJ6 367 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 TFAP2CQ92754 450 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 CEP295NLQ96MC4 621 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 SPATA33Q96N06 139 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 MTMR12Q9C0I1 747 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 NIF3L1Q9GZT8 377 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 SMOXQ9NWM0 555 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 DUS2Q9NX74 493 aaKnown RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 POU2F3Q9UKI9 436 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 HTTP42858 3142 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 KCNU1A8MYU2 1149 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 E7ENX8 843 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 KPNA4O00629 521 aaPredicted RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 ASS1P00966 412 aaKnown RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 LTFP02788 710 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 VDRP11473 427 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 TTKP33981 857 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 MAGEA3P43357 314 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 ABCG1P45844 678 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 NUMBP49757 651 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 CAPSQ13938 189 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 TIGD2Q4W5G0 525 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 CBR4Q8N4T8 237 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 OR7G1Q8NGA0 311 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 MAELQ96JY0 434 aaKnown RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 ZBTB26Q9HCK0 441 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 CNOT6Q9ULM6 557 aaKnown RBP18.36■□□□□ 0.53
PKP3-201ENST00000331563 AURKCQ9UQB9 309 aa18.36■□□□□ 0.53
PKP3-201ENST00000331563 ARID2Q68CP9 1835 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 TADA2AO75478 443 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 PIGNO95427 931 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 BCL10O95999 233 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 CHRNB1P11230 501 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 PRKCQQ04759 706 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 LDLRAP1Q5SW96 308 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 METTL7BQ6UX53 244 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 GK5Q6ZS86 529 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 KCTD8Q6ZWB6 473 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 RAVER1Q8IY67 606 aaKnown RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 HACE1Q8IYU2 909 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 DCLK2Q8N568 766 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 TERB1Q8NA31 727 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 TRUB1Q8WWH5 349 aaKnown RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 PTBP2Q9UKA9 531 aaKnown RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 PCDHGC3Q9UN70 934 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 B3GNT3Q9Y2A9 372 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 TPST1O60507 370 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 TPPPO94811 219 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 TXNP10599 105 aaKnown RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 TFEBP19484 476 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 CCNA2P20248 432 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 MGAT1P26572 445 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 DCKP27707 260 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 NIPAL4Q0D2K0 466 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 PERM1Q5SV97 790 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 LAYNQ6UX15 382 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 CADM3Q8N126 398 aa18.35■□□□□ 0.53
PKP3-201ENST00000331563 NGRNQ9NPE2 291 aaKnown RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 IPO11Q9UI26 975 aaKnown RBP18.35■□□□□ 0.53
PKP3-201ENST00000331563 EVPLQ92817 2033 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 IGKV6D-21A0A0A0MT36 114 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 BCLAF3A2AJT9 711 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 HEATR9A2RTY3 570 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 SLC7A1P30825 629 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 CDH5P33151 784 aaPredicted RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 HMBOX1Q6NT76 420 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 CHST15Q7LFX5 561 aaPredicted RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 CYP2U1Q7Z449 544 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 MMAAQ8IVH4 418 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 SLC4A11Q8NBS3 891 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 RTP4Q96DX8 246 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 GPR20Q99678 358 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 C1orf50Q9BV19 199 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 CAB39LQ9H9S4 337 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 MRPL40Q9NQ50 206 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 RAP2CQ9Y3L5 183 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 COPG1Q9Y678 874 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 SAT1P21673 171 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 EEF1B2P24534 225 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 TNFSF9P41273 254 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 MAGEA6P43360 314 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 TUFMP49411 452 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 HNRNPFP52597 415 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms