RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CLHC1Q8NHS4 586 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ATL1Q8WXF7 558 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 RORBQ92753 470 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ZNF558Q96NG5 402 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 SERPINB11Q96P15 392 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 REEP1Q9H902 201 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 CD52P31358 61 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 IGFALSP35858 605 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 CCT3P49368 545 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 RGS1Q08116 209 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 FAAP100Q0VG06 881 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 CDH17Q12864 832 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 FIBCD1Q8N539 461 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 C12orf50Q8NA57 414 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 CPNE1Q99829 537 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 POLR1EQ9GZS1 481 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 PABPC3Q9H361 631 aaKnown RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 FANCEQ9HB96 536 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 PTGFRNQ9P2B2 879 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 KIAA1257Q9ULG3 409 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 SLC25A14O95258 325 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 ELNP15502 786 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 OMPP47874 163 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 NT5C2P49902 561 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 DLG4P78352 724 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ADGRA1Q86SQ6 560 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 KIAA0319LQ8IZA0 1049 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 KCT2Q8NC54 265 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 DHRS1Q96LJ7 313 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 PANX3Q96QZ0 392 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 NMRAL1Q9HBL8 299 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 GPC6Q9Y625 555 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 TPST2O60704 377 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 NRG1Q02297 640 aaPredicted RBP10.67□□□□□ -0.7
CLN8-201ENST00000331222 SLC26A11Q86WA9 606 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 SNX32Q86XE0 403 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 OR52K2Q8NGK3 314 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 FBXO25Q8TCJ0 367 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 BTBD7Q9P203 1132 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 GNPTGQ9UJJ9 305 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 MYH11P35749 1972 aa10.67□□□□□ -0.7
CLN8-201ENST00000331222 ADGRA3Q8IWK6 1321 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 POU5F1Q01860 360 aaKnown RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 ARSJQ5FYB0 599 aaPredicted RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 LRRC49Q8IUZ0 686 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 ELOVL4Q9GZR5 314 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 MIPP30301 263 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 RAD23AP54725 363 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 FAM183BPQ6ZVS7 135 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 C7orf61Q8IZ16 206 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 NAXEQ8NCW5 288 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 ZNF248Q8NDW4 579 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 SEMA4AQ9H3S1 761 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 ASF1AQ9Y294 204 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 WBP11Q9Y2W2 641 aaKnown RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 PPP2R3BQ9Y5P8 575 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 ASNA1O43681 348 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 TNFRSF21O75509 655 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 H2AFXP16104 143 aaPredicted RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 CRABP2P29373 138 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 AQP1P29972 269 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 SKP1P63208 163 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 LRRC73Q5JTD7 316 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 FNBP1LQ5T0N5 605 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 RUBCNQ92622 972 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 CLIC5Q9NZA1 410 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 PCDHAC2Q9Y5I4 1007 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 A0A1W2PQ67 120 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 WNT10BO00744 389 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 BIRC5O15392 142 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 NOS1APO75052 506 aaPredicted RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 PTPN1P18031 435 aaKnown RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 TUFMP49411 452 aaKnown RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 ACSM2AQ08AH3 577 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 MAD2L1Q13257 205 aaPredicted RBP10.66□□□□□ -0.7
CLN8-201ENST00000331222 ACSM2BQ68CK6 577 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 POLNQ7Z5Q5 900 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 GALNT5Q7Z7M9 940 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 MTA3Q9BTC8 594 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 OSBPL2Q9H1P3 480 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 CMTM6Q9NX76 183 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 OR12D3Q9UGF7 316 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 H3BMM5 538 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 EPHB6O15197 1021 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 PROCP04070 461 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 CCDC153Q494R4 210 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 SLC45A4Q5BKX6 768 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 RASSF6Q6ZTQ3 369 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 KRT73Q86Y46 540 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 HIPK1Q86Z02 1210 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 ZDHHC13Q8IUH4 622 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 GHDCQ8N2G8 530 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 U3KQV3 271 aa10.66□□□□□ -0.7
CLN8-201ENST00000331222 KPNA5O15131 536 aa10.65□□□□□ -0.7
CLN8-201ENST00000331222 TM9SF1O15321 606 aa10.65□□□□□ -0.7
CLN8-201ENST00000331222 DNTTP04053 509 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms