RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ATP8A1Q9Y2Q0 1164 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 EML5Q05BV3 1969 aa16.75■□□□□ 0.27
PDLIM1-201ENST00000329399 TP73O15350 636 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 KCNN4O15554 427 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 OPHN1O60890 802 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 TSHRP16473 764 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 EPHB2P29323 1055 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 FDFT1P37268 417 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 MAGEA6P43360 314 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 GBE1Q04446 702 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 AUHQ13825 339 aaKnown RBP16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 TRIP13Q15645 432 aaPredicted RBP16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 CENPUQ71F23 418 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 WDR5BQ86VZ2 330 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 LONP2Q86WA8 852 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 CHSY1Q86X52 802 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 ZNF683Q8IZ20 524 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 MDGA1Q8NFP4 955 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 OR52K2Q8NGK3 314 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 CYB5D2Q8WUJ1 264 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 UBLCP1Q8WVY7 318 aaPredicted RBP16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 HTR3CQ8WXA8 447 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 ACDQ96AP0 544 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 TMEM109Q9BVC6 243 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM126AQ9BYI3 521 aaPredicted RBP16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 SLC2A11Q9BYW1 496 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 TPSD1Q9BZJ3 242 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 ROPN1BQ9BZX4 212 aaPredicted RBP16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 SIK2Q9H0K1 926 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 SLC6A17Q9H1V8 727 aa16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 ROPN1Q9HAT0 212 aaPredicted RBP16.74■□□□□ 0.27
PDLIM1-201ENST00000329399 GFRA3O60609 400 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 LRIG2O94898 1065 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 RBL1P28749 1068 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 NTSR1P30989 418 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 IL12RB1P42701 662 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 NRLP54845 237 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 SARNPP82979 210 aaKnown RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 LMAN2Q12907 356 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PRKD1Q15139 912 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 FUT11Q495W5 492 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 MPP7Q5T2T1 576 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 MANEALQ5VSG8 457 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 ANO7Q6IWH7 933 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CHPFQ8IZ52 775 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CNPY4Q8N129 248 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CARNMT1Q8N4J0 409 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 DCLK2Q8N568 766 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CAMKK1Q8N5S9 505 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 FIBINQ8TAL6 211 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 HDAC11Q96DB2 347 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 ZIM3Q96PE6 472 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PPP1R2P1Q96PQ5 205 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PPCSQ9HAB8 311 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 THAP10Q9P2Z0 257 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 GGA2Q9UJY4 613 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 VANGL2Q9ULK5 521 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CNTN5O94779 1100 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 APBB3O95704 486 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 TTC4O95801 387 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CTSOP43234 321 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 VPS41P49754 854 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 ARL4CP56559 192 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM193AP78312 1265 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PPIDQ08752 370 aaKnown RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 GALNT2Q10471 571 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 SLC10A2Q12908 348 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 ZNF234Q14588 700 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PTPRNQ16849 979 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PREPLQ4J6C6 727 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CHST9Q7L1S5 443 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 RASSF3Q86WH2 238 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 MFN1Q8IWA4 741 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 APCDD1Q8J025 514 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 ZNF366Q8N895 744 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 NAT8LQ8N9F0 302 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 HJURPQ8NCD3 748 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 TSTD1Q8NFU3 115 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 KCNV2Q8TDN2 545 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 RLN3Q8WXF3 142 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 GABRG3Q99928 467 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CCDC77Q9BR77 488 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CIPCQ9C0C6 399 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 EBF1Q9UH73 591 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 TRHDEQ9UKU6 1024 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 STON1Q9Y6Q2 735 aa16.73■□□□□ 0.27
PDLIM1-201ENST00000329399 CEP250Q9BV73 2442 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 TCRBV21S2A2A0A5A6 115 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 AGPSO00116 658 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 AXIN1O15169 862 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 LMNAP02545 664 aaKnown RBP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 ABHD2P08910 425 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 PABPC1P11940 636 aaKnown RBP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 HLA-EP13747 358 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 TPSB2P20231 275 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 PRKCHP24723 683 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 DGKEP52429 567 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms