RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PROSCO94903 275 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 CYP3A4P08684 503 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 FAM86B2P0C5J1 330 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 SLURP2P0DP57 97 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
SHMT2-201ENST00000328923 TSHRP16473 764 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 MAGP20916 626 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 CBLP22681 906 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 FMO4P31512 558 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 TCP10Q12799 353 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 GPS1Q13098 491 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 PIGGQ5H8A4 983 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 C1orf220Q5T0J3 134 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 OR6F1Q8NGZ6 308 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 RAB2BQ8WUD1 216 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 CEP170P1Q96L14 293 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 RTKNQ9BST9 563 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 GGA3Q9NZ52 723 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 SIRPGQ9P1W8 387 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 SNX13Q9Y5W8 968 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 A8MUA0 341 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 STX16-NPEPL1H3BU86 382 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 PDHXO00330 501 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 LIASO43766 372 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 OR7A10O76100 309 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 IFI30P13284 250 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 CCND2P30279 289 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 SNRPFP62306 86 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 TRIM32Q13049 653 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 ZFP69Q49AA0 526 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 MSS51Q4VC12 460 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 PAGE2BQ5JRK9 111 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 ODR4Q5SWX8 454 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 DESI1Q6ICB0 168 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 AFAP1L2Q8N4X5 818 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 S100ZQ8WXG8 99 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 DLG3Q92796 817 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 KAT5Q92993 513 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 MARC2Q969Z3 335 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 WDR83Q9BRX9 315 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 TTYH2Q9BSA4 534 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 SLA2Q9H6Q3 261 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 TMEM216Q9P0N5 145 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 CPNE7Q9UBL6 633 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 KAT6AQ92794 2004 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 DDTLA6NHG4 134 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 DAB1O75553 588 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 CD4P01730 458 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 CD40LGP29965 261 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 GCLMP48507 274 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 IDH3AP50213 366 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 RPS6P62753 249 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 IL1RL1Q01638 556 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 TNFAIP2Q03169 654 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 RNASEH2BQ5TBB1 312 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 SLCO6A1Q86UG4 719 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 PIAS4Q8N2W9 510 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 CPA6Q8N4T0 437 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 PSMA8Q8TAA3 256 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 MIR1-1HGQ9H1L0 117 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 ABCB10Q9NRK6 738 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 C20orf96Q9NUD7 363 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 ATP6V1HQ9UI12 483 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 NUP50Q9UKX7 468 aa11.99□□□□□ -0.49
SHMT2-201ENST00000328923 PRPF19Q9UMS4 504 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 DRG1Q9Y295 367 aaKnown RBP11.99□□□□□ -0.49
SHMT2-201ENST00000328923 YDJCA8MPS7 323 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 ZBTB14O43829 449 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 BCAS2O75934 225 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 UNGP13051 313 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 DPEP1P16444 411 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 MYF6P23409 242 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 SEPHS1P49903 392 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 ARSEP51690 589 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TGFB2P61812 414 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 POLR2GP62487 172 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 MRPS5P82675 430 aaKnown RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TARDBPQ13148 414 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 MAMDC4Q6UXC1 1216 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 ZBTB49Q6ZSB9 765 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 PCGF5Q86SE9 256 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 CCDC103Q8IW40 242 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 MCOLN2Q8IZK6 566 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 OFCC1Q8IZS5 231 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 DSELQ8IZU8 1212 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 SNX31Q8N9S9 440 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 CDKL2Q92772 493 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 NXPE3Q969Y0 559 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 REXO5Q96IC2 774 aaKnown RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TMEM117Q9H0C3 514 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 PLLPQ9Y342 182 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms