RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RGRP47804 291 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 ARL4CP56559 192 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SARNPP82979 210 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SKOR1P84550 965 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 NSUN2Q08J23 767 aaKnown RBP eCLIP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 CBLBQ13191 982 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 HIF1AQ16665 826 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 C22orf39Q6P5X5 142 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 KDELC1Q6UW63 502 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 ZNF534Q76KX8 674 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SLC44A3Q8N4M1 653 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 ATP11CQ8NB49 1132 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 ISG20Q96AZ6 181 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 RBM15Q96T37 977 aaKnown RBP eCLIP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 XAB2Q9HCS7 855 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 ERVW-1Q9UQF0 538 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 LOC730098B7Z3J9 87 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 K7ERQ8 282 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SMAD6O43541 496 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 MT-CYBP00156 380 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 ATP5BP06576 529 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 DLDP09622 509 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 MLNP12872 115 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 IL9P15248 144 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 CSNK1DP48730 415 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 TFF2Q03403 129 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 MESP2Q0VG99 397 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 NAIF1Q69YI7 327 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SUGP1Q8IWZ8 645 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 RPL10LQ96L21 214 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SERPINB12Q96P63 405 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 CIPCQ9C0C6 399 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 ELOVL2Q9NXB9 296 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 EIF3HO15372 352 aaKnown RBP eCLIP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 INSIG1O15503 277 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 TIMM44O43615 452 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 ATP9BO43861 1147 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 GSRP00390 522 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 ADRA1AP35348 466 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 GRIA2P42262 883 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 MAGEA3P43357 314 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SLMAPQ14BN4 828 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 BEND6Q5SZJ8 279 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 NAPEPLDQ6IQ20 393 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 CENPUQ71F23 418 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 TMC3Q7Z5M5 1100 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 LINC00523Q86TU6 105 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 PDIK1LQ8N165 341 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 PCDH20Q8N6Y1 951 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 IPMKQ8NFU5 416 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 EXOC2Q96KP1 924 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 GDAP1L1Q96MZ0 367 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 PWWP2AQ96N64 755 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 TBL1YQ9BQ87 522 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 TXLNGYQ9BZA5 131 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 ARFGAP3Q9NP61 516 aa10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 SPTBN5Q9NRC6 3674 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-201ENST00000327028 PRRT4C9JH25 899 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 E7ESA3 106 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 PMPCBO75439 489 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 ZNF821O75541 412 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 GJB3O75712 270 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 KAT7O95251 611 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 IGSF6O95976 241 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 APODP05090 189 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SERPINF2P08697 491 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 MAPK8P45983 427 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SOX9P48436 509 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 WNT3AP56704 352 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 AP1S1P61966 158 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SPARCL1Q14515 664 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 IHHQ14623 411 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 PTPRNQ16849 979 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 DNAJC21Q5F1R6 531 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 LRRC8BQ6P9F7 803 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SRLQ86TD4 932 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 CAND1Q86VP6 1230 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 CCDC25Q86WR0 208 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 RELL1Q8IUW5 271 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 KDM1BQ8NB78 822 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 CYB5D2Q8WUJ1 264 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SORCS1Q8WY21 1168 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 FICDQ9BVA6 458 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 C8orf33Q9H7E9 229 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 NOD2Q9HC29 1040 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 PRDM6Q9NQX0 595 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SPECC1L-ADORA2AF8WAN1 911 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 AP3B1O00203 1094 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 ASGR2P07307 311 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 NNMTP40261 264 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SCNN1BP51168 640 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 DHX9Q08211 1270 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 DLG2Q15700 870 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms