RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 C3orf20Q8ND61 904 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 OR13H1Q8NG92 308 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 OR2AP1Q8NGE2 309 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 JOSD2Q8TAC2 188 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM172AQ8WUF8 416 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 SELENOOQ9BVL4 669 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 C1QTNF2Q9BXJ5 285 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 CALN1Q9BXU9 219 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 USP29Q9HBJ7 922 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 GPR27Q9NS67 375 aa18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 FCF1Q9Y324 198 aaKnown RBP18.01■□□□□ 0.47
PTPMT1-201ENST00000326656 ANKRD62A6NC57 917 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 LGALS16A8MUM7 142 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 EPHB6O15197 1021 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 KDELR3O43731 214 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 SDC3O75056 442 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 PAK4O96013 591 aaPredicted RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 CCDC172P0C7W6 258 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 ALPPL2P10696 532 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 GPD1P21695 349 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 RABIFP47224 123 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 YBEYP58557 167 aaPredicted RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 HNRNPKP61978 463 aaKnown RBP eCLIP18■□□□□ 0.47
PTPMT1-201ENST00000326656 MYL5Q02045 173 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 SGCGQ13326 291 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 INO80DQ53TQ3 878 aaPredicted RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 WDR59Q6PJI9 974 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 KYAT3Q6YP21 454 aaKnown RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 SLFN11Q7Z7L1 901 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 DCBLD1Q8N8Z6 715 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 HNRNPLLQ8WVV9 542 aaKnown RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 BMFQ96LC9 184 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 PCMTD1Q96MG8 357 aaPredicted RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 GBP4Q96PP9 640 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 ERGIC2Q96RQ1 377 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 PCDHB18PQ96TA0 734 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 DUSP23Q9BVJ7 150 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 NDFIP2Q9NV92 336 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 EVA1BQ9NVM1 165 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 DONSONQ9NYP3 566 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 NLGN3Q9NZ94 848 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 DNAI1Q9UI46 699 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 TDRD6O60522 2096 aaKnown RBP18■□□□□ 0.47
PTPMT1-201ENST00000326656 MYLKQ15746 1914 aa18■□□□□ 0.47
PTPMT1-201ENST00000326656 SPTY2D1-AS1A0A0U1RR47 76 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM170AA1A519 330 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 C16orf96A6NNT2 1141 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM72CH0Y354 149 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 SCAMP1O15126 338 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 CKMT1AP12532 417 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 ZNF143P52747 638 aaPredicted RBP17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 DAB2P98082 770 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 RAD51Q06609 339 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 COL28A1Q2UY09 1125 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 MYLK3Q32MK0 819 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 RAB6CQ53S08 254 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM72AQ5TYM5 149 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM72DQ6L9T8 149 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 PPP1R2P3Q6NXS1 205 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 PARS2Q7L3T8 475 aaKnown RBP17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM72BQ86X60 149 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 FAM181AQ8N9Y4 354 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 DENND6BQ8NEG7 585 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 MYOCQ99972 504 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 RAB6CQ9H0N0 254 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 ZDHHC6Q9H6R6 413 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 NCKIPSDQ9NZQ3 722 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 NEU3Q9UQ49 428 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 CLCA2Q9UQC9 943 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 CSNK1G3Q9Y6M4 447 aa17.99■□□□□ 0.47
PTPMT1-201ENST00000326656 TOR1BO14657 336 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 FPGTO14772 594 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 CSF2P04141 144 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 GP1BAP07359 652 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 GIMD1P0DJR0 217 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 DESP17661 470 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 CDK11BP21127 795 aaKnown RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 DUSP3P51452 185 aaPredicted RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 SUOXP51687 545 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 CLDN2P57739 230 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 UBXN1Q04323 297 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 FGL2Q14314 439 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 EFHC2Q5JST6 749 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 PHLDB2Q86SQ0 1253 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 SLC22A18ASQ8N1D0 253 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 RYBPQ8N488 228 aaPredicted RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 CCDC185Q8N715 623 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 RTL3Q8N8U3 475 aaKnown RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 KLF6Q99612 283 aaPredicted RBP17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 AGPAT1Q99943 283 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 CNPY3Q9BT09 278 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 TM6SF2Q9BZW4 377 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 FZD3Q9NPG1 666 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 UCKL1Q9NWZ5 548 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 MFHAS1Q9Y4C4 1052 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 AK5Q9Y6K8 562 aa17.98■□□□□ 0.47
PTPMT1-201ENST00000326656 TCRBV5S1A1TA0A578 114 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms