RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 TUBGCP6Q96RT7 1819 aa11.14□□□□□ -0.63
TOP3A-201ENST00000321105 CDK5RAP2Q96SN8 1893 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 J3KR12 359 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 ESRRBO95718 433 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 SELPP16109 830 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 MPSTP25325 297 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 ST8SIA6P61647 398 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 TLE2Q04725 743 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 SDCCAG3Q96C92 435 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF778Q96MU6 729 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 CDRT15Q96T59 188 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 VAT1Q99536 393 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 ZBTB18Q99592 522 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 IGFLR1Q9H665 355 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 NSMCE4AQ9NXX6 385 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 DNMT3LQ9UJW3 386 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 BTRCQ9Y297 605 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 MAGEB16A2A368 324 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 VPS26AO75436 327 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 KRT36O76013 467 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 CNTN5O94779 1100 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 FSBPO95073 299 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 C1RP00736 705 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 PROZP22891 400 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 WARSP23381 471 aaKnown RBP11.13□□□□□ -0.63
TOP3A-201ENST00000321105 IRF9Q00978 393 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 HSPA14Q0VDF9 509 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 TBL3Q12788 808 aaKnown RBP11.13□□□□□ -0.63
TOP3A-201ENST00000321105 LPIN1Q14693 890 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 OR10T2Q8NGX3 314 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 TRPC4APQ8TEL6 797 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 MTFMTQ96DP5 389 aaKnown RBP11.13□□□□□ -0.63
TOP3A-201ENST00000321105 MYCBPQ99417 103 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-201ENST00000321105 BTBD10Q9BSF8 475 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 HPS4Q9NQG7 708 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 TAGLN3Q9UI15 199 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 ASCC3Q8N3C0 2202 aaKnown RBP11.13□□□□□ -0.63
TOP3A-201ENST00000321105 FKTNO75072 461 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-201ENST00000321105 CRTAMO95727 393 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 CLDN10P78369 228 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 GHRHRQ02643 423 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 USP41Q3LFD5 358 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 MILR1Q7Z6M3 343 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 CLNKQ7Z7G1 428 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 Q9H521 79 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 SLC2A6Q9UGQ3 507 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 PCDHB12Q9Y5F1 795 aa11.13□□□□□ -0.63
TOP3A-201ENST00000321105 STK25O00506 426 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 AXIN1O15169 862 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 PEX11AO75192 247 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 DNAJC8O75937 253 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CABYRO75952 493 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CNTFP26441 200 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ABCE1P61221 599 aaKnown RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 XRCC4Q13426 336 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ARL14EPQ8N8R7 260 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 OR4K2Q8NGD2 314 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 TRIM54Q9BYV2 358 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 DYRK4Q9NR20 520 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 SEPT3Q9UH03 358 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ACTL7BQ9Y614 415 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 C5orf60A6NFR6 353 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ENO4A6NNW6 628 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 KPNA3O00505 521 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CASQ2O14958 399 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CCNT2O60583 730 aaKnown RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CKBP12277 381 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ALADP13716 330 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CORO1AP31146 461 aaKnown RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CYLC2Q14093 348 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 DRICH1Q6PGQ1 229 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ANKS3Q6ZW76 656 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 TRIML2Q8N7C3 387 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 AK5Q9Y6K8 562 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 SCN7AQ01118 1682 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 KCNU1A8MYU2 1149 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 FFAR3O14843 346 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 GPR42O15529 346 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 NOL3O60936 208 aaKnown RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 LMNAP02545 664 aaKnown RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 BPGMP07738 259 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 NFKBIAP25963 317 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ACVRL1P37023 503 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 PPP3CCP48454 512 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 CDK18Q07002 472 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 KYAT3Q6YP21 454 aaKnown RBP11.12□□□□□ -0.63
TOP3A-201ENST00000321105 C14orf80Q86SX3 495 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms