RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 APOBEC2Q9Y235 224 aaKnown RBP15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 DUSP11O75319 330 aaKnown RBP15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 MYCP01106 439 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 PGAM1P18669 254 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 NCF2P19878 526 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 CD68P34810 354 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 KCNA10Q16322 511 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 LIMS2Q7Z4I7 341 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF354CQ86Y25 554 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 C10orf107Q8IVU9 208 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 SPATA6LQ8N4H0 392 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 KCTD13Q8WZ19 329 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 CERS2Q96G23 380 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 YIPF2Q9BWQ6 316 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 SPC25Q9HBM1 224 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 CNGB3Q9NQW8 809 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 C20orf96Q9NUD7 363 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 BFARQ9NZS9 450 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 TMEM216Q9P0N5 145 aa15.77■□□□□ 0.11
SHROOM1-201ENST00000319854 GLRBP48167 497 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 IDH3AP50213 366 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 RPL26P61254 145 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 IRF9Q00978 393 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 APOFQ13790 326 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 POU6F1Q14863 301 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 LILRA2Q8N149 483 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 PLD6Q8N2A8 252 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 IPMKQ8NFU5 416 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 B3GALT6Q96L58 329 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF512Q96ME7 567 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 IARS2Q9NSE4 1012 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 NDFIP2Q9NV92 336 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 PCSK1P29120 753 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 CCND3P30281 292 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 SCNN1AP37088 669 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 ATXN3P54252 364 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 MTTPP55157 894 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 CDK18Q07002 472 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 OVOS1Q6IE37 1185 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 NUP93Q8N1F7 819 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 FNDC8Q8TC99 324 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 DQX1Q8TE96 717 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 OXCT2Q9BYC2 517 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF696Q9H7X3 374 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 MAN1C1Q9NR34 630 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 ABT1Q9ULW3 272 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 PSMD13Q9UNM6 376 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 SH3GLB1Q9Y371 365 aa15.76■□□□□ 0.11
SHROOM1-201ENST00000319854 PMPCBO75439 489 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 KLHL2O95198 593 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 NELFEP18615 380 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 GLUD2P49448 558 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 MRPS22P82650 360 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 ARCQ7LC44 396 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 METTL23Q86XA0 190 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 WDR75Q8IWA0 830 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 DCLK2Q8N568 766 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 ZFRQ96KR1 1074 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 SIKE1Q9BRV8 207 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 COPS7BQ9H9Q2 264 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 DCXO43602 365 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 SOAT2O75908 522 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 TNFAIP8O95379 198 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 FGF3P11487 239 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 ODC1P11926 461 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 CRHR1P34998 444 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 PRKCZQ05513 592 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 LPIN1Q14693 890 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 PCSK7Q16549 785 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 MBLAC2Q68D91 279 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 PDPK2PQ6A1A2 396 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 C4orf22Q6V702 233 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 TFAP2DQ7Z6R9 452 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 PSTKQ8IV42 348 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 AHI1Q8N157 1196 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 ATP2A3Q93084 1043 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 MLPHQ9BV36 600 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 EMCNQ9ULC0 261 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 SORCS3Q9UPU3 1222 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 TTC24A2A3L6 582 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 ZBTB14O43829 449 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 SLC1A6P48664 564 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 GPR15P49685 360 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 PAFAH1B3Q15102 231 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 DDR2Q16832 855 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 PDZD4Q76G19 769 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 SLC39A10Q9ULF5 831 aa15.75■□□□□ 0.11
SHROOM1-201ENST00000319854 HHLA1C9JL84 531 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 GPR182O15218 404 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 B4GALT3O60512 393 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 NMBRP28336 390 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 SERPINB9P50453 376 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 ANKDD1AQ495B1 522 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 NOMO2Q5JPE7 1267 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 SNX15Q9NRS6 342 aa15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 RCOR3Q9P2K3 495 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-201ENST00000319854 ZNF487B1APH4 448 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms