RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GRSF1Q12849 480 aaKnown RBP eCLIP15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 DMC1Q14565 340 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 HP1BP3Q5SSJ5 553 aaPredicted RBP15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 DENND2CQ68D51 928 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 DUPD1Q68J44 220 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 TEX26Q8N6G2 289 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 CHST14Q8NCH0 376 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 WFIKKN2Q8TEU8 576 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 CPT1BQ92523 772 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 TTC17Q96AE7 1141 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 SNF8Q96H20 258 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 GDAP1L1Q96MZ0 367 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 ZNF599Q96NL3 588 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 PSKH2Q96QS6 385 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 SCUBE2Q9NQ36 999 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 ARHGEF3Q9NR81 526 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 PCDHGC4Q9Y5F7 938 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 KRBA1A5PL33 1030 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 SHISA7A6NL88 538 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 TMEM63AO94886 807 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 SEC31AO94979 1220 aaKnown RBP15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 EPHX1P07099 455 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 MYBL2P10244 700 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 PRKCHP24723 683 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 IVDP26440 423 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 VSNL1P62760 191 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 UBXN2BQ14CS0 331 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 MLF2Q15773 248 aaPredicted RBP15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 ITPRIPL1Q6GPH6 555 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 DPY19L3Q6ZPD9 716 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 VAT1Q99536 393 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 MGME1Q9BQP7 344 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 MLPHQ9BV36 600 aaPredicted RBP15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 FOXQ1Q9C009 403 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 C8orf33Q9H7E9 229 aaPredicted RBP15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 SLC2A4RGQ9NR83 387 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 TRHDEQ9UKU6 1024 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 NFU1Q9UMS0 254 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 ATP8A1Q9Y2Q0 1164 aa15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 MTF2Q9Y483 593 aaPredicted RBP15.61■□□□□ 0.09
PDLIM5-202ENST00000318007 RNF40O75150 1001 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 AVILO75366 819 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 BANF1O75531 89 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 GEMIN4P57678 1058 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 CALCOCO2Q13137 446 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 GLE1Q53GS7 698 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 INO80DQ53TQ3 878 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 LRRC73Q5JTD7 316 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 Q6ZS52 159 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 PRPF39Q86UA1 669 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 FLCNQ8NFG4 579 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 MYRIPQ8NFW9 859 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 FBXO25Q8TCJ0 367 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 UCMAQ8WVF2 138 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 FSD1LQ9BXM9 530 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 TRPV5Q9NQA5 729 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 GRHL1Q9NZI5 618 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 TPX2Q9ULW0 747 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 DNALI1O14645 258 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 MMP2P08253 660 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 CCNHP51946 323 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 GALNT3Q14435 633 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 RFTN1Q14699 578 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 EIF4HQ15056 248 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 PARP6Q2NL67 630 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 TMEM196Q5HYL7 178 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 NUDT18Q6ZVK8 323 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 SYDE1Q6ZW31 735 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 CCDC25Q86WR0 208 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 CAMK1DQ8IU85 385 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 SLC25A41Q8N5S1 370 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 OR2AP1Q8NGE2 309 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 RPLP0P6Q8NHW5 317 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 ARRDC2Q8TBH0 407 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 LRRC45Q96CN5 670 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 SMIM14Q96QK8 99 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 ANAPC5Q9UJX4 755 aa15.6■□□□□ 0.09
PDLIM5-202ENST00000318007 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 TP73O15350 636 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 AGTP01019 485 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 UQCRHP07919 91 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 CHRNA4P43681 627 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 PRPSAP1Q14558 356 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 PTPRRQ15256 657 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 RNASEH2BQ5TBB1 312 aaKnown RBP15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 TXNDC5Q8NBS9 432 aaKnown RBP15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 OR2A12Q8NGT7 310 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 CCHCR1Q8TD31 782 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 FRS2Q8WU20 508 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 PTPRN2Q92932 1015 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 ZBTB9Q96C00 473 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 FICDQ9BVA6 458 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 PARD6BQ9BYG5 372 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 SLC25A51Q9H1U9 297 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 CHKBQ9Y259 395 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 DNAH14Q0VDD8 3507 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 DMDP11532 3685 aa15.59■□□□□ 0.09
PDLIM5-202ENST00000318007 A0A0U1RQS6 177 aa15.58■□□□□ 0.09
PDLIM5-202ENST00000318007 BDP1A6H8Y1 2624 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms