RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SPON1Q9HCB6 807 aa8.82□□□□□ -1
USF3-201ENST00000316407 MOXD2PA6NHM9 499 aa8.82□□□□□ -1
USF3-201ENST00000316407 STRIP1Q5VSL9 837 aa8.82□□□□□ -1
USF3-201ENST00000316407 C1orf189Q5VU69 101 aa8.82□□□□□ -1
USF3-201ENST00000316407 CYP20A1Q6UW02 462 aa8.82□□□□□ -1
USF3-201ENST00000316407 OR52L1Q8NGH7 329 aa8.82□□□□□ -1
USF3-201ENST00000316407 CACNA1CQ13936 2221 aa8.82□□□□□ -1
USF3-201ENST00000316407 A0A0A6YYK5 440 aaPredicted RBP8.82□□□□□ -1
USF3-201ENST00000316407 MTAPQ13126 283 aa8.82□□□□□ -1
USF3-201ENST00000316407 C15orf59Q2T9L4 293 aaPredicted RBP8.82□□□□□ -1
USF3-201ENST00000316407 SUSD4Q5VX71 490 aa8.82□□□□□ -1
USF3-201ENST00000316407 SLC34A3Q8N130 599 aa8.82□□□□□ -1
USF3-201ENST00000316407 MCOLN3Q8TDD5 553 aa8.82□□□□□ -1
USF3-201ENST00000316407 DNAJC11Q9NVH1 559 aa8.82□□□□□ -1
USF3-201ENST00000316407 TRPM5Q9NZQ8 1165 aa8.82□□□□□ -1
USF3-201ENST00000316407 FAM149AA5PLN7 773 aa8.82□□□□□ -1
USF3-201ENST00000316407 BCKDKO14874 412 aa8.82□□□□□ -1
USF3-201ENST00000316407 CCNE2O96020 404 aa8.82□□□□□ -1
USF3-201ENST00000316407 GPR15P49685 360 aa8.82□□□□□ -1
USF3-201ENST00000316407 CCNG2Q16589 344 aa8.82□□□□□ -1
USF3-201ENST00000316407 FAM117BQ6P1L5 589 aa8.82□□□□□ -1
USF3-201ENST00000316407 CCDC3Q9BQI4 270 aa8.82□□□□□ -1
USF3-201ENST00000316407 IRAK3Q9Y616 596 aa8.82□□□□□ -1
USF3-201ENST00000316407 AKAP3O75969 853 aa8.82□□□□□ -1
USF3-201ENST00000316407 ALDH1A1P00352 501 aa8.82□□□□□ -1
USF3-201ENST00000316407 SERPINA6P08185 405 aa8.82□□□□□ -1
USF3-201ENST00000316407 MRPL45Q9BRJ2 306 aaKnown RBP8.82□□□□□ -1
USF3-201ENST00000316407 GNEQ9Y223 722 aaKnown RBP8.82□□□□□ -1
USF3-201ENST00000316407 ACADSBP45954 432 aa8.81□□□□□ -1
USF3-201ENST00000316407 OVOS1Q6IE37 1185 aa8.81□□□□□ -1
USF3-201ENST00000316407 KYAT3Q6YP21 454 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 GK5Q6ZS86 529 aa8.81□□□□□ -1
USF3-201ENST00000316407 CYP4V2Q6ZWL3 525 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 HERC6Q8IVU3 1022 aa8.81□□□□□ -1
USF3-201ENST00000316407 ZZZ3Q8IYH5 903 aa8.81□□□□□ -1
USF3-201ENST00000316407 GATAD2BQ8WXI9 593 aa8.81□□□□□ -1
USF3-201ENST00000316407 ATG10Q9H0Y0 220 aa8.81□□□□□ -1
USF3-201ENST00000316407 FADS3Q9Y5Q0 445 aa8.81□□□□□ -1
USF3-201ENST00000316407 C6orf222P0C671 652 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 IL1R1P14778 569 aa8.81□□□□□ -1
USF3-201ENST00000316407 OR2B6P58173 313 aa8.81□□□□□ -1
USF3-201ENST00000316407 DLG4P78352 724 aa8.81□□□□□ -1
USF3-201ENST00000316407 RPRD1AQ96P16 312 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 OMDQ99983 421 aa8.81□□□□□ -1
USF3-201ENST00000316407 ALG2Q9H553 416 aa8.81□□□□□ -1
USF3-201ENST00000316407 CYP3A43Q9HB55 503 aa8.81□□□□□ -1
USF3-201ENST00000316407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.81□□□□□ -1
USF3-201ENST00000316407 F5H6K3 240 aa8.81□□□□□ -1
USF3-201ENST00000316407 DGAT1O75907 488 aa8.81□□□□□ -1
USF3-201ENST00000316407 THRBP10828 461 aa8.81□□□□□ -1
USF3-201ENST00000316407 NRG1Q02297 640 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 KLRC3Q07444 240 aa8.81□□□□□ -1
USF3-201ENST00000316407 BBS4Q96RK4 519 aa8.81□□□□□ -1
USF3-201ENST00000316407 C3orf18Q9UK00 162 aa8.81□□□□□ -1
USF3-201ENST00000316407 ANXA11P50995 505 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 CBWD3Q5JTY5 395 aa8.81□□□□□ -1
USF3-201ENST00000316407 CBWD5Q5RIA9 395 aa8.81□□□□□ -1
USF3-201ENST00000316407 SPAG16Q8N0X2 631 aa8.81□□□□□ -1
USF3-201ENST00000316407 ASCC3Q8N3C0 2202 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 Q96MT0 163 aa8.81□□□□□ -1
USF3-201ENST00000316407 TDRD3Q9H7E2 651 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 ARPC4-TTLL3A0A0A6YYG9 625 aa8.81□□□□□ -1
USF3-201ENST00000316407 FGFR1P11362 822 aa8.81□□□□□ -1
USF3-201ENST00000316407 EPORP19235 508 aa8.81□□□□□ -1
USF3-201ENST00000316407 AMPD1P23109 780 aa8.81□□□□□ -1
USF3-201ENST00000316407 RALGPS2Q86X27 583 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 EIF1ADQ8N9N8 165 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 PNPT1Q8TCS8 783 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 LSM7Q9UK45 103 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 RFX7Q2KHR2 1363 aa8.81□□□□□ -1
USF3-201ENST00000316407 PGRMC2O15173 223 aa8.81□□□□□ -1
USF3-201ENST00000316407 SLC2A3P11169 496 aa8.81□□□□□ -1
USF3-201ENST00000316407 MAD2L1Q13257 205 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 AUHQ13825 339 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 PSMD5Q16401 504 aa8.81□□□□□ -1
USF3-201ENST00000316407 PDK4Q16654 411 aa8.81□□□□□ -1
USF3-201ENST00000316407 CXXC5Q7LFL8 322 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 ARMC10Q8N2F6 343 aa8.81□□□□□ -1
USF3-201ENST00000316407 MAP3K4Q9Y6R4 1608 aa8.81□□□□□ -1
USF3-201ENST00000316407 OR10H3O60404 316 aa8.81□□□□□ -1
USF3-201ENST00000316407 GNA12Q03113 381 aa8.81□□□□□ -1
USF3-201ENST00000316407 SQLEQ14534 574 aa8.81□□□□□ -1
USF3-201ENST00000316407 SYT12Q8IV01 421 aa8.81□□□□□ -1
USF3-201ENST00000316407 APBB2Q92870 758 aa8.81□□□□□ -1
USF3-201ENST00000316407 SLC38A2Q96QD8 506 aa8.81□□□□□ -1
USF3-201ENST00000316407 INTS10Q9NVR2 710 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 BAZ2AQ9UIF9 1905 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 A0A0B4J269 797 aa8.81□□□□□ -1
USF3-201ENST00000316407 ZSCAN5BA6NJL1 495 aa8.81□□□□□ -1
USF3-201ENST00000316407 HKDC1Q2TB90 917 aa8.81□□□□□ -1
USF3-201ENST00000316407 LIN52Q52LA3 116 aa8.81□□□□□ -1
USF3-201ENST00000316407 C10orf107Q8IVU9 208 aa8.81□□□□□ -1
USF3-201ENST00000316407 CARNMT1Q8N4J0 409 aa8.81□□□□□ -1
USF3-201ENST00000316407 TMEM168Q9H0V1 697 aa8.81□□□□□ -1
USF3-201ENST00000316407 DENND2DQ9H6A0 471 aaPredicted RBP8.81□□□□□ -1
USF3-201ENST00000316407 REXO2Q9Y3B8 237 aaKnown RBP8.81□□□□□ -1
USF3-201ENST00000316407 HEG1Q9ULI3 1381 aa8.81□□□□□ -1
USF3-201ENST00000316407 DNM1LO00429 736 aa8.81□□□□□ -1
USF3-201ENST00000316407 GSC2O15499 205 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms