RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ZNF845Q96IR2 970 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TIGD1Q96MW7 591 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 CDK5RAP1Q96SZ6 601 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RNF26Q9BY78 433 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 FRMD8Q9BZ67 464 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 API5Q9BZZ5 524 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 FTOQ9C0B1 505 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 SFXN1Q9H9B4 322 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 BABAM1Q9NWV8 329 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 LRIT1Q9P2V4 623 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 CORO1CQ9ULV4 474 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 KIAA0232Q92628 1395 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 USP54Q70EL1 1684 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 POLR2AP24928 1970 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TEX13CA0A0J9YWL9 993 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 PABPN1LA6NDY0 278 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RRHO14718 337 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 CEP104O60308 925 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 SGPL1O95470 568 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 SPARCP09486 303 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 HSPA1AP0DMV8 641 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 HSPA1BP0DMV9 641 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 HKR1P10072 659 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 PORP16435 677 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RPS6KB1P23443 525 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 KRT20P35900 424 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 GPD2P43304 727 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 NAP1L1P55209 391 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 NLRP5P59047 1200 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 AARS2Q5JTZ9 985 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM65Q6PI78 240 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RANBP10Q6VN20 620 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 IKBIPQ70UQ0 350 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RHPN2Q8IUC4 686 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TTC39CQ8N584 583 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 SCAIQ8N9R8 606 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 CXorf38Q8TB03 319 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 ETNPPLQ8TBG4 499 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 CELF1Q92879 486 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 CAVIN3Q969G5 261 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 GATA5Q9BWX5 397 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 GLIS2Q9BZE0 524 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 Q9N2J8 555 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 MLXIPLQ9NP71 852 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 IL17RBQ9NRM6 502 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 NSMCE4AQ9NXX6 385 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 MKLN1Q9UL63 735 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 OSGIN2Q9Y236 505 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM94Q12767 1356 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RGPD1P0DJD0 1748 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 C1orf167Q5SNV9 1468 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 A0A1W2PQM1 296 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 hCG_1807616A0A1W2PRN6 198 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 GRID2IPA4D2P6 1211 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 AGAP14A8MT82 685 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TACC1O75410 805 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 GSTM2P28161 218 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ABCD1P33897 745 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ARL3P36405 182 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 HSPA2P54652 639 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM115Q12893 351 aaPredicted RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 LARS2Q15031 903 aaKnown RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 PTPAQ15257 358 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TAF7Q15545 349 aaPredicted RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 GPR162Q16538 588 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TSTD2Q5T7W7 516 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF280DQ6N043 979 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 DHRS13Q6UX07 377 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SLC29A4Q7RTT9 530 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SZRD1Q7Z422 152 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ARHGEF25Q86VW2 580 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 LSMEM1Q8N8F7 131 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TNIP2Q8NFZ5 429 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SH3RF3Q8TEJ3 882 aaPredicted RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 KLHL29Q96CT2 875 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 REPS1Q96D71 796 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 WDFY2Q96P53 400 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 NPLQ9BXD5 320 aaPredicted RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 C1QTNF3Q9BXJ4 246 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 HCN3Q9P1Z3 774 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 NLKQ9UBE8 527 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TSPYL4Q9UJ04 414 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ADAM21Q9UKJ8 722 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TNNQ9UQP3 1299 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SOS1Q07889 1333 aaPredicted RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 NPHP3Q7Z494 1330 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MSH6P52701 1360 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 DCCP43146 1447 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 DLG5Q8TDM6 1919 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 KIF1AQ12756 1690 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 TARSL2A2RTX5 802 aaKnown RBP4.3□□□□□ -1.72
SMCO3-201ENST00000316048 SYNDIG1LA6NDD5 238 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 MCIDASD6RGH6 385 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 USP12O75317 370 aa4.3□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF202O95125 648 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms