RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NAT14Q8WUY8 206 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PGAP3Q96FM1 320 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF184Q99676 751 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FERMT1Q9BQL6 677 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 CLSTN3Q9BQT9 956 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 VCXQ9H320 206 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 NOL6Q9H6R4 1146 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IRAK4Q9NWZ3 460 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ETAA1Q9NY74 926 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IPO11Q9UI26 975 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SLC24A2Q9UI40 661 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PCDHGB4Q9UN71 923 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PCDHGB5Q9Y5G0 923 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 TDRD15B5MCY1 1934 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 TRIM43BA6NCK2 446 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PRRG1O14668 218 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 LIN7AO14910 233 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 AHCYL1O43865 530 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IGLV3-25P01717 112 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 HLA-DQB2P05538 268 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 LYNP07948 512 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ETV4P43268 484 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 RANBP1P43487 201 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SGSHP51688 502 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 GALNT2Q10471 571 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 CDC16Q13042 620 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 USP4Q13107 963 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 CTBP1Q13363 440 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF460Q14592 562 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IHHQ14623 411 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FAM219BQ5XKK7 198 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IL31Q6EBC2 164 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IRGCQ6NXR0 463 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PDZD4Q76G19 769 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 TDRPQ86YL5 185 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SCUBE1Q8IWY4 988 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 RNF148Q8N7C7 305 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IRGQQ8WZA9 623 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 TRIM43Q96BQ3 446 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 APOPT1Q96IL0 206 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FSD1LQ9BXM9 530 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 UBE2OQ9C0C9 1292 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SMG9Q9H0W8 520 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FBXO44Q9H4M3 255 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 MAN1C1Q9NR34 630 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ARHGEF38Q9NXL2 777 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 LNPEPQ9UIQ6 1025 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 OGDHLQ9ULD0 1010 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SCML2Q9UQR0 700 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ASB3Q9Y575 518 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 RALGAPA2Q2PPJ7 1873 aa7.71□□□□□ -1.17
TRIM55-202ENST00000315962 SYN3O14994 580 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 VAPBO95292 243 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 FAM163BP0C2L3 166 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SYN1P17600 705 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 PEX2P28328 305 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 GSTT1P30711 240 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SERPINB6P35237 376 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 DSC2Q02487 901 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 MRPL58Q14197 206 aaKnown RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 NADSYN1Q6IA69 706 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 LINGO4Q6UY18 593 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 RNF111Q6ZNA4 994 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 ATG14Q6ZNE5 492 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 RASSF3Q86WH2 238 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 PSTKQ8IV42 348 aaKnown RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 DENND6AQ8IWF6 608 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 REM2Q8IYK8 340 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 LGI2Q8N0V4 545 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 PPP1R14CQ8TAE6 165 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 NMD3Q96D46 503 aaKnown RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 MTBPQ96DY7 904 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 IGSF21Q96ID5 467 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TEKT5Q96M29 485 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SERPINB11Q96P15 392 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 FICDQ9BVA6 458 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 CFHR5Q9BXR6 569 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 VPS11Q9H270 941 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TLR8Q9NR97 1041 aaKnown RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 C20orf96Q9NUD7 363 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SENP1Q9P0U3 644 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TXNDC16Q9P2K2 825 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 RCOR3Q9P2K3 495 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 MYO9BQ13459 2157 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 IQANK1A0A1B0GTG1 560 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SLC38A8A6NNN8 435 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 HACD1B0YJ81 288 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TRAFD1O14545 582 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TPP1O14773 563 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 KLKB1P03952 638 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 RAG1P15918 1043 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 MX2P20592 715 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SLC6A4P31645 630 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 CD86P42081 329 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 MAGEA3P43357 314 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 BTKQ06187 659 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 EIF4EBP2Q13542 120 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 SFT2D3Q587I9 215 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms