RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 MRPL46Q9H2W6 279 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 MRPL17Q9NRX2 175 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 AP2A1O95782 977 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 HNRNPDQ14103 355 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 PTPRNQ16849 979 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 ISLR2Q6UXK2 745 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 DCAKDQ8WVC6 231 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 COL18A1P39060 1754 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 E9PAM4 449 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FAM72CH0Y354 149 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 MRASO14807 208 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 MAP4P27816 1152 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 CRHR1P34998 444 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 SLC10A2Q12908 348 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 ARMC12Q5T9G4 340 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FAM72AQ5TYM5 149 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FAM72DQ6L9T8 149 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 ITIH5Q86UX2 942 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FAM72BQ86X60 149 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 AGAP2Q99490 1192 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 GBA3Q9H227 469 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 TIAM2Q8IVF5 1701 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 MOXD2PA6NHM9 499 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 KCNU1A8MYU2 1149 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 INPP5AQ14642 412 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FAM45BPQ6NSW5 357 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 CYP2R1Q6VVX0 501 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 YAF2Q8IY57 180 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FAM45AQ8TCE6 357 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 HMCESQ96FZ2 354 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 PKD2L2Q9NZM6 624 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 IGSF9Q9P2J2 1179 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 VPS9D1Q9Y2B5 631 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 SLC34A1Q06495 639 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 FBXO48Q5FWF7 155 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 PPP1R15BQ5SWA1 713 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 SCIMPQ6UWF3 145 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 LINGO4Q6UY18 593 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 PSMG2Q969U7 264 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 ASB8Q9H765 288 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 AGO3Q9H9G7 860 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 SRRDQ9UH36 339 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 PCDHGC4Q9Y5F7 938 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 LTA4HP09960 611 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 RHOQP17081 205 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 CLCN5P51795 746 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 TAS2R39P59534 338 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 USP41Q3LFD5 358 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 TRIM4Q9C037 500 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 VTI1BQ9UEU0 232 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 AGO1Q9UL18 857 aaKnown RBP6.26□□□□□ -1.41
PRKDC-201ENST00000314191 BTRCQ9Y297 605 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 DTNAQ9Y4J8 743 aa6.26□□□□□ -1.41
PRKDC-201ENST00000314191 CCNT2O60583 730 aaKnown RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 ZNF7P17097 686 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CTPS1P17812 591 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 MARCH8Q5T0T0 291 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 UBXN11Q5T124 520 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 STXBP5Q5T5C0 1151 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 SLC22A9Q8IVM8 553 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CRTAC1Q9NQ79 661 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 SERPIND1P05546 499 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 IL10P22301 178 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 MZF1P28698 734 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 TTLL9Q3SXZ7 439 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 PABPC1LQ4VXU2 614 aaKnown RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 RARS2Q5T160 578 aaKnown RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 POTEHQ6S545 545 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 ARCQ7LC44 396 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 KCTD13Q8WZ19 329 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 SLC9A7Q96T83 725 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 NPY6RQ99463 290 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 USP29Q9HBJ7 922 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 RAD54BQ9Y620 910 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CLASP2O75122 1294 aaKnown RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 COX4I1P13073 169 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 TACR2P21452 398 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 OR52K2Q8NGK3 314 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 PTPN18Q99952 460 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 BATF3Q9NR55 127 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 ZNF180Q9UJW8 692 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 PLA2G4CQ9UP65 541 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 PCDHB12Q9Y5F1 795 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 FKBP6O75344 327 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CORO1AP31146 461 aaKnown RBP6.25□□□□□ -1.41
PRKDC-201ENST00000314191 ZNF280BQ86YH2 543 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 TRPC4APQ8TEL6 797 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CORO1BQ9BR76 489 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 PHACTR1Q9C0D0 580 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CCDC90BQ9GZT6 254 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 CDH19Q9H159 772 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 GID8Q9NWU2 228 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 A0A087X1B8 175 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 PEX11AO75192 247 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 ZCCHC18P0CG32 403 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 IYDQ6PHW0 289 aa6.25□□□□□ -1.41
PRKDC-201ENST00000314191 RIPOR1Q6ZS17 1223 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms