RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ARHGAP26Q9UNA1 814 aa16.95■□□□□ 0.3
CLCF1-201ENST00000312438 MYO18AQ92614 2054 aaKnown RBP16.95■□□□□ 0.3
CLCF1-201ENST00000312438 LOC285095A0A1B0GVY8 99 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 HMX2A2RU54 273 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 GRXCR1A8MXD5 290 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 CBX4O00257 560 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 LEFTY2O00292 366 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 SCAMP3O14828 347 aaKnown RBP16.94■□□□□ 0.3
CLCF1-201ENST00000312438 MUSKO15146 869 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 CES1P23141 567 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 GP5P40197 560 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 CCR2P41597 374 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 POU6F1Q14863 301 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 SLC1A5Q15758 541 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 ARHGAP15Q53QZ3 475 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 MPP7Q5T2T1 576 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 STXBP5Q5T5C0 1151 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 GPR158Q5T848 1215 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 TEDDM1Q5T9Z0 273 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 PDPK2PQ6A1A2 396 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 SPRED2Q7Z698 418 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 CPLX4Q7Z7G2 160 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 KCNMB4Q86W47 210 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 SLC25A41Q8N5S1 370 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 TTC16Q8NEE8 873 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 GDAP1Q8TB36 358 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 ZNF473Q8WTR7 871 aaKnown RBP16.94■□□□□ 0.3
CLCF1-201ENST00000312438 MAGEB18Q96M61 343 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
CLCF1-201ENST00000312438 PRKD2Q9BZL6 878 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 PRKAG3Q9UGI9 489 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 TCAF1Q9Y4C2 921 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 DOCK4Q8N1I0 1966 aa16.94■□□□□ 0.3
CLCF1-201ENST00000312438 TTC24A2A3L6 582 aaPredicted RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 XYLBO75191 536 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 RFPL1O75677 317 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 CA3P07451 260 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 SERPINF2P08697 491 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 GLDCP23378 1020 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 AVPR1AP37288 418 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 SERPINH1P50454 418 aaKnown RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 BMPR2Q13873 1038 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 IHHQ14623 411 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 SLC14A2Q15849 920 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 MPPE1Q53F39 396 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 FSCBQ5H9T9 825 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 C9orf50Q5SZB4 431 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 BBS7Q8IWZ6 715 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 SHKBP1Q8TBC3 707 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 TCP10LQ8TDR4 215 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 DDI1Q8WTU0 396 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 APOPT1Q96IL0 206 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 ZNF778Q96MU6 729 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 PAIP2Q9BPZ3 127 aaKnown RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 FEM1AQ9BSK4 669 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 FAM107BQ9H098 131 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 TASP1Q9H6P5 420 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 IL1RAPL1Q9NZN1 696 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 NYNRINQ9P2P1 1898 aaKnown RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 HEATR9A2RTY3 570 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 NRG2O14511 850 aaPredicted RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 RHOP08100 348 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 VIMP08670 466 aaKnown RBP16.93■□□□□ 0.3
CLCF1-201ENST00000312438 EPCAMP16422 314 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 DRD4P21917 467 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 CHRNA4P43681 627 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 NUMBP49757 651 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 CDK18Q07002 472 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 CDH18Q13634 790 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 CYTH1Q15438 398 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 HSP90AA5PQ58FG0 334 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 HHATQ5VTY9 493 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 CMTM8Q8IZV2 173 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 IFT43Q96FT9 208 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 RANBP9Q96S59 729 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 NSMCE4AQ9NXX6 385 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 ACTL7AQ9Y615 435 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 PSAT1Q9Y617 370 aa16.93■□□□□ 0.3
CLCF1-201ENST00000312438 E2F8A0AVK6 867 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 COPEO14579 308 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 PAMP19021 973 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 SPRP35270 261 aaPredicted RBP16.92■□□□□ 0.3
CLCF1-201ENST00000312438 ERVK-21P61565 698 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 MSLNQ13421 630 aaPredicted RBP16.92■□□□□ 0.3
CLCF1-201ENST00000312438 GPM6BQ13491 265 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 FAM109BQ6ICB4 259 aaPredicted RBP16.92■□□□□ 0.3
CLCF1-201ENST00000312438 LVRNQ6Q4G3 990 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 STRA8Q7Z7C7 330 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 MFN1Q8IWA4 741 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 LRRC34Q8IZ02 419 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 ACMSDQ8TDX5 336 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 TCEAL4Q96EI5 215 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 FEM1CQ96JP0 617 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 ZDHHC7Q9NXF8 308 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 SLC17A6Q9P2U8 582 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 OR51B4Q9Y5P0 310 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 ALPK3Q96L96 1907 aa16.92■□□□□ 0.3
CLCF1-201ENST00000312438 TCP11X1B4DZS4 312 aa16.91■□□□□ 0.3
CLCF1-201ENST00000312438 MOSPD3O75425 235 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms