RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 EML4Q9HC35 981 aaKnown RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 CASTOR2A6NHX0 329 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 RNF103O00237 685 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 GSC2O15499 205 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 ZMPSTE24O75844 475 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 PDE9AO76083 593 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 POLBP06746 335 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 VCLP18206 1134 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 SOX6P35712 828 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 SLC5A3P53794 718 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 IST1P53990 364 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 SLC6A3Q01959 620 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 ZNF177Q13360 481 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 DGCR6Q14129 220 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 KRT72Q14CN4 511 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 FUT11Q495W5 492 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 LDLRAP1Q5SW96 308 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 ZCCHC23Q6ZST2 131 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 AMIGO2Q86SJ2 522 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 RSPH1Q8WYR4 309 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 TADA1Q96BN2 335 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 TUBGCP5Q96RT8 1024 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 FRMD8P1Q9BZ68 369 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 ILKAPQ9H0C8 392 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 R3HDMLQ9H3Y0 253 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 ARL8BQ9NVJ2 186 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 MBL2P11226 248 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 ITGAXP20702 1163 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 RPL22P35268 128 aaKnown RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 SPRP35270 261 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 EIF2S3P41091 472 aaKnown RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 ELK3P41970 407 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 PSEN2P49810 448 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 TPTEP56180 551 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 EFEMP1Q12805 493 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 SLC44A2Q8IWA5 706 aaPredicted RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 MRPS31Q92665 395 aaKnown RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 TWNKQ96RR1 684 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 COLEC11Q9BWP8 271 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 ROGDIQ9GZN7 287 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 STARD7Q9NQZ5 370 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 SLC25A13Q9UJS0 675 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 DRG1Q9Y295 367 aaKnown RBP9.39□□□□□ -0.91
XCR1-201ENST00000309285 TSPAN1O60635 241 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 HSMCR30P0CW71 290 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 SMPD1P17405 629 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 CCNA2P20248 432 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 CDKN2BP42772 138 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 PTP4A2Q12974 167 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 ZFP1Q6P2D0 407 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 CLPTM1LQ96KA5 538 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 KLHL32Q96NJ5 620 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 RAD18Q9NS91 495 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 NENFQ9UMX5 172 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 WASF2Q9Y6W5 498 aa9.39□□□□□ -0.91
XCR1-201ENST00000309285 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 PQBP1O60828 265 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 POMCP01189 267 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 MMP3P08254 477 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 CD48P09326 243 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 CYP2F1P24903 491 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 ECHS1P30084 290 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 SERPINH1P50454 418 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 ADIGQ0VDE8 80 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 AASDHQ4L235 1098 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 CTXN3Q4LDR2 81 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 UBE2Q1Q7Z7E8 422 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 XYLT1Q86Y38 959 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 BHLHE22Q8NFJ8 381 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 MAGEB10Q96LZ2 347 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 SMAD5Q99717 465 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 MRPL45Q9BRJ2 306 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 OSBPL6Q9BZF3 934 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TUBGCP4Q9UGJ1 667 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 SLC24A2Q9UI40 661 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 HEATR9A2RTY3 570 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 ME2P23368 584 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TTKP33981 857 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 SOAT1P35610 550 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 GRM5P41594 1212 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 POU5F1Q01860 360 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 SPANXN2Q5MJ10 180 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 TAF2Q6P1X5 1199 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TMEM53Q6P2H8 277 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 KLHL17Q6TDP4 642 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TRIM48Q8IWZ4 208 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 CINPQ9BW66 212 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 SMPD4Q9NXE4 827 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 NKX1-2Q9UD57 310 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms