RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 PPP1R14CQ8TAE6 165 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 SH3TC2Q8TF17 1288 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 ZNF296Q8WUU4 475 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 TMEM175Q9BSA9 504 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 DENND2DQ9H6A0 471 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 OLA1Q9NTK5 396 aaKnown RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 NKX1-2Q9UD57 310 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 SLC38A8A6NNN8 435 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 TBKBP1A7MCY6 615 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 MUSKO15146 869 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 ACVRL1P37023 503 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 CD86P42081 329 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 SLC1A2P43004 574 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 RENBPP51606 427 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 ZNF460Q14592 562 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 E2F5Q15329 346 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 C5orf22Q49AR2 442 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 PREPLQ4J6C6 727 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 ZNF789Q5FWF6 425 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 SLC41A1Q8IVJ1 513 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 SLC25A41Q8N5S1 370 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 C2CD4AQ8NCU7 369 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 PPHLN1Q8NEY8 458 aaKnown RBP16.71■□□□□ 0.27
TVP23B-201ENST00000307767 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 TTPALQ9BTX7 342 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 TUBB6Q9BUF5 446 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 NMRAL1Q9HBL8 299 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 COMMD8Q9NX08 183 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 NSMCE4AQ9NXX6 385 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 PCDHB12Q9Y5F1 795 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
TVP23B-201ENST00000307767 TLR5O60602 858 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 SERPINA6P08185 405 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 HADHAP40939 763 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 IDH3AP50213 366 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 SERINC3Q13530 473 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 MARC1Q5VT66 337 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 RNF168Q8IYW5 571 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-201ENST00000307767 OR52K2Q8NGK3 314 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 OR13J1Q8NGT2 312 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 KCTD4Q8WVF5 259 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 PPP1R2P1Q96PQ5 205 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 GATA5Q9BWX5 397 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-201ENST00000307767 FSD1LQ9BXM9 530 aa16.7■□□□□ 0.26
TVP23B-201ENST00000307767 UBE2OQ9C0C9 1292 aaKnown RBP16.7■□□□□ 0.26
TVP23B-201ENST00000307767 CPSF2Q9P2I0 782 aaKnown RBP16.7■□□□□ 0.26
TVP23B-201ENST00000307767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 TK2O00142 265 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 CXCL10P02778 98 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 ATXN1LP0C7T5 689 aaKnown RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 RPL17P18621 184 aaKnown RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 CCND1P24385 295 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 SLC6A4P31645 630 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 AVPR1AP37288 418 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 SMARCB1Q12824 385 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 UBAP2LQ14157 1087 aaKnown RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 USP10Q14694 798 aaKnown RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 ACCSLQ4AC99 568 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 SLC8B1Q6J4K2 584 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 PABPC5Q96DU9 382 aaKnown RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 NSMCE3Q96MG7 304 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 RANBP9Q96S59 729 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 SIKE1Q9BRV8 207 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 EBF2Q9HAK2 575 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 PDFQ9HBH1 243 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 ACSS2Q9NR19 701 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 OXSMQ9NWU1 459 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 LOC285095A0A1B0GVY8 99 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 PRR5-ARHGAP8B1AHC4 643 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 SLC8A1P32418 973 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 CPA2P48052 419 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 ARHGAP8P85298 464 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 IL10RBQ08334 325 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 VWA5B1Q5TIE3 1220 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 ZNF781Q8N8C0 355 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 FBXO22Q8NEZ5 403 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 RPRD1AQ96P16 312 aaPredicted RBP16.69■□□□□ 0.26
TVP23B-201ENST00000307767 VPS45Q9NRW7 570 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 LRFN2Q9ULH4 789 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 SCN5AQ14524 2016 aa16.69■□□□□ 0.26
TVP23B-201ENST00000307767 FAM95CA0A1B0GW59 222 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 H3BNC9 293 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 H7C4K7 107 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 ESRRAP11474 423 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-201ENST00000307767 TACR2P21452 398 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 NUMBP49757 651 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 ALDH18A1P54886 795 aaKnown RBP16.68■□□□□ 0.26
TVP23B-201ENST00000307767 TAS2R39P59534 338 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 ELAVL2Q12926 359 aaKnown RBP16.68■□□□□ 0.26
TVP23B-201ENST00000307767 TSTD2Q5T7W7 516 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 ZYG11AQ6WRX3 759 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.68■□□□□ 0.261e-7■■■■□ 23.8
TVP23B-201ENST00000307767 WDR75Q8IWA0 830 aaKnown RBP16.68■□□□□ 0.26
TVP23B-201ENST00000307767 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 MAPK15Q8TD08 544 aa16.68■□□□□ 0.26
TVP23B-201ENST00000307767 C2orf15Q8WU43 125 aaKnown RBP16.68■□□□□ 0.26
TVP23B-201ENST00000307767 STYXQ8WUJ0 223 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms