RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 METTL6Q8TCB7 284 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 POMKQ9H5K3 350 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CD84Q9UIB8 345 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CHKBQ9Y259 395 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 C4BPAP04003 597 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ILF2Q12905 390 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 MAD2L1Q13257 205 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 CCDC153Q494R4 210 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 GPR135Q8IZ08 494 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 C1orf127Q8N9H9 656 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 RNF157Q96PX1 679 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ABCB8Q9NUT2 735 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ADAM21Q9UKJ8 722 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 TMCC3Q9ULS5 477 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 H0Y858 1186 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 CSF2RAP15509 400 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 MC4RP32245 332 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 CLK3P49761 638 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 GALNT13Q8IUC8 556 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 SH3RF2Q8TEC5 729 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 MYBPHLA2RUH7 354 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ZNF682O95780 498 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ETS1P14921 441 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC9A5Q14940 896 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 DNAL1Q4LDG9 190 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 DNAJB7Q7Z6W7 309 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 IL12RB2Q99665 862 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ELOVL2Q9NXB9 296 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 PRKAG3Q9UGI9 489 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 COLEC10Q9Y6Z7 277 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 DNALI1O14645 258 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 SCAMP1O15126 338 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 CYP1A2P05177 515 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 SF1Q15637 639 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 AADACL2Q6P093 401 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 C2orf73Q8N5S3 287 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 PABPC3Q9H361 631 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 CAAP1Q9H8G2 361 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 KLHL28Q9NXS3 571 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 USP15Q9Y4E8 981 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 PCDHA11Q9Y5I1 949 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 RGS14O43566 566 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 GJA1P17302 382 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 LMO2P25791 158 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 RPL7AP62424 266 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 CNGA3Q16281 694 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 FAAH2Q6GMR7 532 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ARMCX6Q7L4S7 300 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 ZNF670Q9BS34 389 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 STXBP5LQ9Y2K9 1186 aa10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 HBS1LQ9Y450 684 aaKnown RBP10.81□□□□□ -0.68
SYNPO2-201ENST00000307142 WNT7AO00755 349 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 WARSP23381 471 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 NTSP30990 170 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 FMO1Q01740 532 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 STX5Q13190 355 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 GNA13Q14344 377 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 GRM2Q14416 872 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 ZNHIT3Q15649 155 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 NEPROQ6NW34 567 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 LONP2Q86WA8 852 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 TRIB2Q92519 343 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 RPL10LQ96L21 214 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 QRFPRQ96P65 431 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 RAD9AQ99638 391 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC39A8Q9C0K1 460 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 LACRTQ9GZZ8 138 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 ZDHHC4Q9NPG8 344 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 BAIAP3O94812 1187 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 PIK3CGP48736 1102 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 GATMP50440 423 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 KHDRBS2Q5VWX1 349 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 FAM45BPQ6NSW5 357 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC39A5Q6ZMH5 540 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 AGMOQ6ZNB7 445 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 PHF13Q86YI8 300 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 DEFB119Q8N690 84 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 FAM45AQ8TCE6 357 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 ATL1Q8WXF7 558 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 KCNK16Q96T55 309 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 PSME2Q9UL46 239 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CILPO75339 1184 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 ADH5P11766 374 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 LRRC32Q14392 662 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 N4BP2L1Q5TBK1 243 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 MDM1Q8TC05 714 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 IRGQQ8WZA9 623 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 UBE2E3Q969T4 207 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SAMD11Q96NU1 681 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC9A7Q96T83 725 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 NDNQ99608 321 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 RSPH9Q9H1X1 276 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 PRDM12Q9H4Q4 367 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms