RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CYP2B6P20813 491 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 GRK2P25098 689 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 ZNF132P52740 706 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 MAPK11Q15759 364 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 TEX44Q53QW1 395 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 SDHAF4Q5VUM1 108 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 LPGAT1Q92604 370 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 CYP2S1Q96SQ9 504 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 SPC25Q9HBM1 224 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 CNTN3Q9P232 1028 aa14.77□□□□□ -0.05
PTPN9-201ENST00000306726 C1orf232A0A0U1RR37 186 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ARHGAP10A1A4S6 786 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 RNASEH2AO75792 299 aaKnown RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 AKR1A1P14550 325 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 PGAM1P18669 254 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 SERPINB8P50452 374 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 FASTKQ14296 549 aaKnown RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 PLA2G4EQ3MJ16 856 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 TRIM74Q86UV6 250 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 TRIM73Q86UV7 250 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 SPPL2CQ8IUH8 684 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 RAET1EQ8TD07 263 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 DGCR14Q96DF8 476 aaKnown RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ULBP1Q9BZM6 244 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 UPF3AQ9H1J1 476 aaKnown RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 LRRC40Q9H9A6 602 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ACOT9Q9Y305 439 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 AP4S1Q9Y587 144 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 OR51F1A6NGY5 319 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 IGHA2P01877 340 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 PTPN7P35236 360 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 FLT3LGP49771 235 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 PSME3P61289 254 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 NAA20P61599 178 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 GSTA3Q16772 222 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ESRP1Q6NXG1 681 aaKnown RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 FSTL5Q8N475 847 aaPredicted RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 MAGEE2Q8TD90 523 aaPredicted RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ING2Q9H160 280 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ABCG8Q9H221 673 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ALG9Q9H6U8 611 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 AURKAO14965 403 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 ATG7O95352 703 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 GFAPP14136 432 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 FUT4P22083 530 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 CRABP2P29373 138 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 GGT5P36269 586 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 SGO1Q5FBB7 561 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 PERM1Q5SV97 790 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 FAM35AQ86V20 835 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 UBR7Q8N806 425 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 APPL2Q8NEU8 664 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 CDC26Q8NHZ8 85 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 MCRS1Q96EZ8 462 aa14.76□□□□□ -0.05
PTPN9-201ENST00000306726 EVLQ9UI08 416 aaPredicted RBP14.76□□□□□ -0.05
PTPN9-201ENST00000306726 E7ENX8 843 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 PMM2O15305 246 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 SNAI1O95863 264 aaPredicted RBP14.75□□□□□ -0.05
PTPN9-201ENST00000306726 CPOXP36551 454 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 PTPRCAPQ14761 206 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 TBCELQ5QJ74 424 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 CD99L2Q8TCZ2 262 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 TUBGCP3Q96CW5 907 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 SORT1Q99523 831 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 AP5M1Q9H0R1 490 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 MPP6Q9NZW5 540 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 PCDHGC3Q9UN70 934 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 COMMD3-BMI1R4GMX3 469 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 RGSL1A5PLK6 1076 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 CASTOR2A6NHX0 329 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 HDAC3O15379 428 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 BEST1O76090 585 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 RECQL4O94761 1208 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 PRKCGP05129 697 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 WSCD1Q658N2 575 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 TAPT1Q6NXT6 567 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 HERC6Q8IVU3 1022 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 DNAAF2Q9NVR5 837 aaKnown RBP14.75□□□□□ -0.05
PTPN9-201ENST00000306726 ATXN10Q9UBB4 475 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 PSMD13Q9UNM6 376 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 PTGES3LE9PB15 166 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 ZNF23P17027 643 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 TRAF2Q12933 501 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 C6orf10Q5SRN2 563 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 NCBP2-AS2Q69YL0 99 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 ARHGAP36Q6ZRI8 547 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 BEST2Q8NFU1 509 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 DGCR6LQ9BY27 220 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 KATNBL1Q9H079 304 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 DGKBQ9Y6T7 804 aa14.75□□□□□ -0.05
PTPN9-201ENST00000306726 NUP214P35658 2090 aaPredicted RBP14.75□□□□□ -0.05
PTPN9-201ENST00000306726 FAM159BA6NKW6 160 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 TOR1BO14657 336 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 MRASO14807 208 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 UBDO15205 165 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 BNIP3LO60238 219 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 TNFAIP8O95379 198 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms