RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TTPAP49638 278 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 SATB1Q01826 763 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 LY6G5CQ5SRR4 150 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 AADACL2Q6P093 401 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ZNF438Q7Z4V0 828 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 TMEM110Q86TL2 294 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ARMC5Q96C12 935 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 PRPF18Q99633 342 aaKnown RBP9.37□□□□□ -0.91
PTPRE-202ENST00000306042 ZFYVE1Q9HBF4 777 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 CRYL1Q9Y2S2 319 aa9.37□□□□□ -0.91
PTPRE-202ENST00000306042 LIASO43766 372 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 GLRA3O75311 464 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 GUCA1CO95843 209 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 FTH1P02794 183 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SCNN1AP37088 669 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 GP5P40197 560 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 MARCKSL1P49006 195 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SKP1P63208 163 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 DSG1Q02413 1049 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SHHQ15465 462 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 UBXN11Q5T124 520 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 B3GNT9Q6UX72 402 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 HLA-CQ95604 372 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 HMCESQ96FZ2 354 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PPP1R36Q96LQ0 422 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 CASD1Q96PB1 797 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 COPS8Q99627 209 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SNX10Q9Y5X0 201 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SCN9AQ15858 1988 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 RAD51BO15315 384 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 FOXD2O60548 495 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 OAZ2O95190 189 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 HOXB2P14652 356 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 MAT2AP31153 395 aaKnown RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 IL1RL1Q01638 556 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 TEX44Q53QW1 395 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 LYPLAL1Q5VWZ2 237 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ZDHHC20Q5W0Z9 365 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SCARA3Q6AZY7 606 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 RPAINQ86UA6 219 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PYROXD2Q8N2H3 581 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 CASKIN2Q8WXE0 1202 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 MAGEB10Q96LZ2 347 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ACTR8Q9H981 624 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 DCDC2Q9UHG0 476 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 GNPTGQ9UJJ9 305 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 RNF225M0QZC1 329 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 MFSD11O43934 449 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 RASSF9O75901 435 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 EPCAMP16422 314 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 DGKAP23743 735 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 AKT2P31751 481 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ARFIP2P53365 341 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 FOXD4Q12950 439 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 EFTUD2Q15029 972 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 USP6NLQ92738 828 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PPWD1Q96BP3 646 aaKnown RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 LRRC39Q96DD0 335 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SERPINI1Q99574 410 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ELAC2Q9BQ52 826 aaKnown RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 WRAP53Q9BUR4 548 aaKnown RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PABPC3Q9H361 631 aaKnown RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PAK6Q9NQU5 681 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ZDHHC7Q9NXF8 308 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 LIMD1Q9UGP4 676 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 GGA2Q9UJY4 613 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 CHADO15335 359 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ZSCAN5DPP0CG00 497 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 CCNCP24863 283 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ADRA1DP25100 572 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 HOXD13P35453 343 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 C6orf10Q5SRN2 563 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PHYKPLQ8IUZ5 450 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 BEND7Q8N7W2 519 aaPredicted RBP9.36□□□□□ -0.91
PTPRE-202ENST00000306042 VPS37AQ8NEZ2 397 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SLC35F5Q8WV83 523 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 CD101Q93033 1021 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PAFAH2Q99487 392 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 P2RY13Q9BPV8 354 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 ADAM7Q9H2U9 754 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SLC32A1Q9H598 525 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 PTPRHQ9HD43 1115 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 SUSD2Q9UGT4 822 aa9.36□□□□□ -0.91
PTPRE-202ENST00000306042 HEPACAM2A8MVW5 462 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 DCTN3O75935 186 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 PSMC3P17980 439 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 NRLP54845 237 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 IL10RBQ08334 325 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 TSNAXIP1Q2TAA8 658 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 CRTC3Q6UUV7 619 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 LRIG3Q6UXM1 1119 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 FAM151BQ6UXP7 276 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SPATS2Q86XZ4 545 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 OR2W6PQ8NHA6 318 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 PLEKHO2Q8TD55 490 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms