RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ARHGEF18Q6ZSZ5 1173 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 TRMT11Q7Z4G4 463 aaKnown RBP27.52■■■□□ 2
HDAC3-201ENST00000305264 SYNPOQ8N3V7 929 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 TAB3Q8N5C8 712 aaPredicted RBP27.52■■■□□ 2
HDAC3-201ENST00000305264 CCDC26Q8TAB7 109 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 GDAP1L1Q96MZ0 367 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 MFSD1Q9H3U5 465 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 GLOD4Q9HC38 313 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 PCDH9Q9HC56 1237 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 POLR3BQ9NW08 1133 aaPredicted RBP27.52■■■□□ 2
HDAC3-201ENST00000305264 FEZ2Q9UHY8 353 aaPredicted RBP27.52■■■□□ 2
HDAC3-201ENST00000305264 ANKRD36A6QL64 1941 aa27.52■■■□□ 2
HDAC3-201ENST00000305264 SIN3BO75182 1162 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 IGSF6O95976 241 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 GSRP00390 522 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 KRT14P02533 472 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 SCNN1BP51168 640 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 NIPAL4Q0D2K0 466 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 GAS6Q14393 721 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 CARD16Q5EG05 197 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 C9orf64Q5T6V5 341 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 CWF19L1Q69YN2 538 aaKnown RBP27.51■■■□□ 2
HDAC3-201ENST00000305264 JAMLQ86YT9 394 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 NSMCE3Q96MG7 304 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 SEMA3CQ99985 751 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 GBA3Q9H227 469 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 RSPH14Q9UHP6 348 aa27.51■■■□□ 2
HDAC3-201ENST00000305264 INSIG1O15503 277 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 RAD51CO43502 376 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 PSMB4P28070 264 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 RPL22P35268 128 aaKnown RBP27.51■■□□□ 1.99
HDAC3-201ENST00000305264 VPS41P49754 854 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 CCNHP51946 323 aaPredicted RBP27.51■■□□□ 1.99
HDAC3-201ENST00000305264 SNRPD1P62314 119 aaKnown RBP27.51■■□□□ 1.99
HDAC3-201ENST00000305264 NSUN2Q08J23 767 aaKnown RBP eCLIP27.51■■□□□ 1.99
HDAC3-201ENST00000305264 DHX34Q14147 1143 aaKnown RBP27.51■■□□□ 1.99
HDAC3-201ENST00000305264 CHST14Q8NCH0 376 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 ARRDC2Q8TBH0 407 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 GORASP1Q9BQQ3 440 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 TRIM51Q9BSJ1 452 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 OSBPL6Q9BZF3 934 aa27.51■■□□□ 1.99
HDAC3-201ENST00000305264 EVLQ9UI08 416 aaPredicted RBP27.51■■□□□ 1.99
HDAC3-201ENST00000305264 ALADP13716 330 aa27.5■■□□□ 1.99
HDAC3-201ENST00000305264 GKP32189 559 aa27.5■■□□□ 1.99
HDAC3-201ENST00000305264 IHHQ14623 411 aa27.5■■□□□ 1.99
HDAC3-201ENST00000305264 PPP1R7Q15435 360 aa27.5■■□□□ 1.99
HDAC3-201ENST00000305264 RYBPQ8N488 228 aaPredicted RBP27.5■■□□□ 1.99
HDAC3-201ENST00000305264 VOPP1Q96AW1 172 aa27.5■■□□□ 1.99
HDAC3-201ENST00000305264 NOD2Q9HC29 1040 aa27.5■■□□□ 1.99
HDAC3-201ENST00000305264 METTL18O95568 372 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 HOXB2P14652 356 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 ACTN2P35609 894 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 FAXCQ5TGI0 409 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 ITPRIPL1Q6GPH6 555 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SDE2Q6IQ49 451 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 KIAA1211LQ6NV74 962 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 MMGT1Q8N4V1 131 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 NUDCD1Q96RS6 583 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SCUBE2Q9NQ36 999 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 PRSS16Q9NQE7 514 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 HAUS2Q9NVX0 235 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 PAK5Q9P286 719 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 MMP17Q9ULZ9 603 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SIT1Q9Y3P8 196 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 MMP2P08253 660 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 COL9A1P20849 921 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 RECQLP46063 649 aaPredicted RBP27.49■■□□□ 1.99
HDAC3-201ENST00000305264 HSF5Q4G112 596 aaPredicted RBP27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SRLQ86TD4 932 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 STK40Q8N2I9 435 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SPATA22Q8NHS9 363 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 CLDN23Q96B33 292 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 IMP4Q96G21 291 aaKnown RBP27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SLC25A51Q9H1U9 297 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 SUN2Q9UH99 717 aa27.49■■□□□ 1.99
HDAC3-201ENST00000305264 A0A1W2PQF6 199 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 DCNP07585 359 aaKnown RBP27.48■■□□□ 1.99
HDAC3-201ENST00000305264 PTK6Q13882 451 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 PLPP6Q8IY26 295 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 RBM15Q96T37 977 aaKnown RBP eCLIP27.48■■□□□ 1.993e-6■■■■□ 20.8
HDAC3-201ENST00000305264 ZDHHC6Q9H6R6 413 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 C2orf42Q9NWW7 574 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 TARSL2A2RTX5 802 aaKnown RBP27.48■■□□□ 1.99
HDAC3-201ENST00000305264 TMEM221A6NGB7 291 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 M0R296 226 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 CD86P42081 329 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 CSNK1DP48730 415 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 CAMK2GQ13555 558 aaPredicted RBP27.48■■□□□ 1.99
HDAC3-201ENST00000305264 MYLK3Q32MK0 819 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 C8orf74Q6P047 294 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 PRPF39Q86UA1 669 aaKnown RBP27.48■■□□□ 1.99
HDAC3-201ENST00000305264 GRIN3AQ8TCU5 1115 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 OXNAD1Q96HP4 312 aaPredicted RBP27.48■■□□□ 1.99
HDAC3-201ENST00000305264 FCRL5Q96RD9 977 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 UBP1Q9NZI7 540 aa27.48■■□□□ 1.99
HDAC3-201ENST00000305264 SYNCRIPO60506 623 aaKnown RBP27.47■■□□□ 1.99
HDAC3-201ENST00000305264 MT-CYBP00156 380 aaPredicted RBP27.47■■□□□ 1.99
HDAC3-201ENST00000305264 CTSLP07711 333 aa27.47■■□□□ 1.99
HDAC3-201ENST00000305264 ELAVL3Q14576 367 aaKnown RBP27.47■■□□□ 1.99
HDAC3-201ENST00000305264 EOGTQ5NDL2 527 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms