RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 OVGP1Q12889 678 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 MYLK3Q32MK0 819 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 SPECC1LQ69YQ0 1117 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 RFX8Q6ZV50 586 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 HORMAD1Q86X24 394 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 OR6K2Q8NGY2 324 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 GDAP1L1Q96MZ0 367 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 CNTNAP3BQ96NU0 1288 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 CNTNAP3Q9BZ76 1288 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 LRRC19Q9H756 370 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 PCDH8O95206 1070 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 IGSF6O95976 241 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 HNRNPH3P31942 346 aaKnown RBP26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 RAD51Q06609 339 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 PIGHQ14442 188 aaPredicted RBP26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 INAVAQ3KP66 663 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 ZNF805Q5CZA5 627 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 PPP6R3Q5H9R7 873 aaPredicted RBP26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 ALKBH5Q6P6C2 394 aaKnown RBP26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 CYP4V2Q6ZWL3 525 aaPredicted RBP26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 GLRX5Q86SX6 157 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 KCTD15Q96SI1 283 aaPredicted RBP26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 CDC6Q99741 560 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 KLC2Q9H0B6 622 aa26.86■■□□□ 1.89
CDKN2A-201ENST00000304494 A0A1B0GTQ1 180 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 YKT6O15498 198 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 AP1G1O43747 822 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 GRK6P43250 576 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 HCAR3P49019 387 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 NXPH1P58417 271 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 RHOAP61586 193 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 ZNF284Q2VY69 593 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 KIAA1161Q6NSJ0 714 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 PARS2Q7L3T8 475 aaKnown RBP26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 ZSCAN30Q86W11 494 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 OXR1Q8N573 874 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 RHBDD1Q8TEB9 315 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 RAB7BQ96AH8 199 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 ZWILCHQ9H900 591 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 ERVMER34-1Q9H9K5 563 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 UBA2Q9UBT2 640 aaPredicted RBP26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 IP6K2Q9UHH9 426 aa26.85■■□□□ 1.89
CDKN2A-201ENST00000304494 ARHGAP42A6NI28 874 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 CYP1A2P05177 515 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 GKP32189 559 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 ARRB1P49407 418 aaPredicted RBP26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 RPS21P63220 83 aaKnown RBP26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 BOLA3Q53S33 107 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 CCDC122Q5T0U0 273 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 ATXN7L2Q5T6C5 722 aaPredicted RBP26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 FEM1CQ96JP0 617 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 NUP85Q9BW27 656 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 ANAPC7Q9UJX3 599 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 WASF3Q9UPY6 502 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 FADS3Q9Y5Q0 445 aa26.84■■□□□ 1.89
CDKN2A-201ENST00000304494 C16orf96A6NNT2 1141 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 SLC31A1O15431 190 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 TPM1P09493 284 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 ERCC2P18074 760 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 HNRNPA2B1P22626 353 aaKnown RBP26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 AKT2P31751 481 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 GDPD4Q6W3E5 623 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 NIPA2Q8N8Q9 360 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 BAHD1Q8TBE0 780 aaPredicted RBP26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 ARHGEF26Q96DR7 871 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 CELF6Q96J87 481 aaKnown RBP26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 ZFR2Q9UPR6 939 aaKnown RBP26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 MFHAS1Q9Y4C4 1052 aa26.83■■□□□ 1.89
CDKN2A-201ENST00000304494 TMEM131Q92545 1883 aa26.83■■□□□ 1.88
CDKN2A-201ENST00000304494 H3BRJ5 948 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 PRAMEF11O60813 436 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 UGT2B4P06133 528 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 PRLRP16471 622 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 IL9RQ01113 521 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 DPYSL2Q16555 572 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 TMEM259Q4ZIN3 620 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 TMEM145Q8NBT3 493 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 OR8K1Q8NGG5 319 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 KLK6Q92876 244 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 SLC39A8Q9C0K1 460 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 PDFQ9HBH1 243 aa26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 ZNHIT6Q9NWK9 470 aaKnown RBP26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 CWC15Q9P013 229 aaKnown RBP26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 APOBEC2Q9Y235 224 aaKnown RBP26.82■■□□□ 1.88
CDKN2A-201ENST00000304494 TSPAN6O43657 245 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 ARL4AP40617 200 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 PAPOLAP51003 745 aaKnown RBP26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 DPYSQ14117 519 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 AFMIDQ63HM1 303 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 SEL1L3Q68CR1 1132 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 LZTR1Q8N653 840 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 FAM174AQ8TBP5 190 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 KLHDC7BQ96G42 594 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 KLHL32Q96NJ5 620 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 DNAJC7Q99615 494 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 BTBD3Q9Y2F9 522 aa26.81■■□□□ 1.88
CDKN2A-201ENST00000304494 PCNX2A6NKB5 2137 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 J3KR12 359 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 MYO1FO00160 1098 aa26.8■■□□□ 1.88
CDKN2A-201ENST00000304494 NEMP1O14524 444 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms