RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 CENPBD1B2RD01 187 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 DYNC1LI2O43237 492 aaPredicted RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 APRTP07741 180 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 PEX6Q13608 980 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 GPR107Q5VW38 600 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 C16orf46Q6P387 395 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 ZNF670Q9BS34 389 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 NPLQ9BXD5 320 aaPredicted RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 MOV10Q9HCE1 1003 aaKnown RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 ZC3H7BQ9UGR2 993 aaKnown RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 ATP11BQ9Y2G3 1177 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 KRT37O76014 449 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 MYO1DO94832 1006 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 SNRPAP09012 282 aaKnown RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 ENO2P09104 434 aaPredicted RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 TFE3P19532 575 aaPredicted RBP18.9■□□□□ 0.62
TRABD-201ENST00000303434 GJA5P36382 358 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 MAGEA6P43360 314 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 IDH3AP50213 366 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 ADAM17P78536 824 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 SELENBP1Q13228 472 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 FSCBQ5H9T9 825 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 C16orf89Q6UX73 402 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 USP43Q70EL4 1123 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 CTAGE3PQ8IX95 158 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 SIX6OS1Q8N1H7 587 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 PPM1NQ8N819 430 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 PDPRQ8NCN5 879 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 GPRC5AQ8NFJ5 357 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 ACDQ96AP0 544 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 ZNF778Q96MU6 729 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 LPIN3Q9BQK8 851 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 COQ10BQ9H8M1 238 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 PLEKHA5Q9HAU0 1116 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 POPDC2Q9HBU9 364 aa18.9■□□□□ 0.62
TRABD-201ENST00000303434 HOXA11P31270 313 aaPredicted RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 SNX16P57768 344 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 IFITM2Q01629 132 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 GNA12Q03113 381 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 DGKDQ16760 1214 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 KIZQ2M2Z5 673 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 DCAF4L1Q3SXM0 396 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 BHLHE22Q8NFJ8 381 aaPredicted RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 PDCD6IPQ8WUM4 868 aaKnown RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 MED30Q96HR3 178 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 PLAC1Q9HBJ0 212 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 DERAQ9Y315 318 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 A0A1W2PQ67 120 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 CXorf49A8MYA2 514 aaPredicted RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 TRDMT1O14717 391 aaKnown RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 GMNNO75496 209 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 GCATO75600 419 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 ZMPSTE24O75844 475 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 MYCLP1P12525 358 aaPredicted RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 XRCC1P18887 633 aaPredicted RBP18.89■□□□□ 0.61
TRABD-201ENST00000303434 CYP2F1P24903 491 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 ZBTB6Q15916 424 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 LGSNQ5TDP6 509 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 SIGIRRQ6IA17 410 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 GALNT18Q6P9A2 607 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 ZDHHC17Q8IUH5 632 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 C7orf31Q8N865 590 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 TNIP2Q8NFZ5 429 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 OR6B3Q8NGW1 331 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 KATNBL1Q9H079 304 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 GINS2Q9Y248 185 aa18.89■□□□□ 0.61
TRABD-201ENST00000303434 C1orf232A0A0U1RR37 186 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 TRIM64A6NGJ6 449 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 NOL3O60936 208 aaKnown RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 GUCY1B2O75343 617 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 RNASEH2AO75792 299 aaKnown RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 NCF2P19878 526 aaPredicted RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 THOP1P52888 689 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 NFATC3Q12968 1075 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 PIGGQ5H8A4 983 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 WDR45BQ5MNZ6 344 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 ZNF618Q5T7W0 954 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 TMCO5AQ8N6Q1 288 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 SPERTQ8NA61 448 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 C18orf25Q96B23 403 aaPredicted RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 MAGEB5Q9BZ81 275 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 SLC13A1Q9BZW2 595 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 CRNNQ9UBG3 495 aaPredicted RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 ZNF487B1APH4 448 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 BCAS2O75934 225 aaPredicted RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 PRKCHP24723 683 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 SLC10A2Q12908 348 aaPredicted RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 TRAF2Q12933 501 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 BNC2Q6ZN30 1099 aaPredicted RBP18.88■□□□□ 0.61
TRABD-201ENST00000303434 ZCCHC23Q6ZST2 131 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 UNC93AQ86WB7 457 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 PHTF2Q8N3S3 785 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 MCUQ8NE86 351 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 CLEC4CQ8WTT0 213 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 DPEP3Q9H4B8 488 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 PACSIN3Q9UKS6 424 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms