RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZNF235Q14590 738 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 RNF219Q5W0B1 726 aaPredicted RBP22.58■■□□□ 1.2
SMAD1-201ENST00000302085 SPRED2Q7Z698 418 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 STRA8Q7Z7C7 330 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 CACNA2D3Q8IZS8 1091 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 SPOCK2Q92563 424 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 ATP2A3Q93084 1043 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 FAM111AQ96PZ2 611 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 POLR1EQ9GZS1 481 aaKnown RBP22.58■■□□□ 1.2
SMAD1-201ENST00000302085 MRM3Q9HC36 420 aaKnown RBP22.58■■□□□ 1.2
SMAD1-201ENST00000302085 IARS2Q9NSE4 1012 aaKnown RBP22.58■■□□□ 1.2
SMAD1-201ENST00000302085 MKS1Q9NXB0 559 aa22.58■■□□□ 1.2
SMAD1-201ENST00000302085 TBL1XO60907 577 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 ALDOAP04075 364 aaKnown RBP22.57■■□□□ 1.2
SMAD1-201ENST00000302085 ALADP13716 330 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 ESRP1Q6NXG1 681 aaKnown RBP22.57■■□□□ 1.2
SMAD1-201ENST00000302085 C6orf89Q6UWU4 347 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 NDUFAF2Q8N183 169 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 PTCD2Q8WV60 388 aaKnown RBP22.57■■□□□ 1.2
SMAD1-201ENST00000302085 ZNF75CPQ92670 426 aaPredicted RBP22.57■■□□□ 1.2
SMAD1-201ENST00000302085 PCMTD2Q9NV79 361 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 TXNDC16Q9P2K2 825 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 PRKAG3Q9UGI9 489 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 SLC2A6Q9UGQ3 507 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 PLLPQ9Y342 182 aa22.57■■□□□ 1.2
SMAD1-201ENST00000302085 LOC285095A0A1B0GVY8 99 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 WDR91A4D1P6 747 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 LINC01553A4QN01 128 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 GOLGA8TH3BQL2 631 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 CCL16O15467 120 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 SLC7A9P82251 487 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 ZKSCAN8Q15776 578 aaPredicted RBP22.56■■□□□ 1.2
SMAD1-201ENST00000302085 RBBP8Q99708 897 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 CORO1BQ9BR76 489 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 C17orf80Q9BSJ5 609 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 VPS11Q9H270 941 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 UBA2Q9UBT2 640 aaPredicted RBP22.56■■□□□ 1.2
SMAD1-201ENST00000302085 A0A1W2PRU2 124 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 MYL4P12829 197 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 ARCN1P48444 511 aaKnown RBP22.56■■□□□ 1.2
SMAD1-201ENST00000302085 SERPINH1P50454 418 aaKnown RBP22.56■■□□□ 1.2
SMAD1-201ENST00000302085 CLCN4P51793 760 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 FSCBQ5H9T9 825 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 STXBP5Q5T5C0 1151 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 PDPK2PQ6A1A2 396 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 ALG1LQ6GMV1 187 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 SPATS2Q86XZ4 545 aaKnown RBP22.56■■□□□ 1.2
SMAD1-201ENST00000302085 FAM217AQ8IXS0 508 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 ELMOD1Q8N336 334 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 TMA16Q96EY4 203 aaKnown RBP22.56■■□□□ 1.2
SMAD1-201ENST00000302085 MCMBPQ9BTE3 642 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 TREX1Q9NSU2 369 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 DENND4CQ5VZ89 1909 aa22.56■■□□□ 1.2
SMAD1-201ENST00000302085 MYLKQ15746 1914 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 TPP1O14773 563 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 SNX3O60493 162 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 ATXN1LP0C7T5 689 aaKnown RBP22.55■■□□□ 1.2
SMAD1-201ENST00000302085 ARNTP27540 789 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 CRHR1P34998 444 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 SIRPB2Q5JXA9 342 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 CGB2Q6NT52 195 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 CCDC197Q8NCU1 140 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 LRRC8CQ8TDW0 803 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 ACMSDQ8TDX5 336 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 MGME1Q9BQP7 344 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 SLC46A2Q9BY10 475 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 TLR9Q9NR96 1032 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 HCFC1R1Q9NWW0 138 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 SEPT3Q9UH03 358 aa22.55■■□□□ 1.2
SMAD1-201ENST00000302085 ARHGEF15O94989 841 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 VAPBO95292 243 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CKMP06732 381 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CDC25CP30307 473 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 SPRP35270 261 aaPredicted RBP22.54■■□□□ 1.2
SMAD1-201ENST00000302085 PDE1BQ01064 536 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 SEPT6Q14141 434 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CYTH1Q15438 398 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 PPM1LQ5SGD2 360 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 FAM47EQ6ZV65 393 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 HTR3DQ70Z44 454 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CARNMT1Q8N4J0 409 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 HJURPQ8NCD3 748 aaPredicted RBP22.54■■□□□ 1.2
SMAD1-201ENST00000302085 TTC16Q8NEE8 873 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 NSMCE3Q96MG7 304 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 PSKH2Q96QS6 385 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CFAP97Q9P2B7 532 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CBX4O00257 560 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 C1RP00736 705 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CCR2P41597 374 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 LIMK2P53671 638 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 PDE1CQ14123 709 aaPredicted RBP22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CNGA3Q16281 694 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 MICALCLQ6ZW33 695 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 BBS5Q8N3I7 341 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 CABS1Q96KC9 395 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 RANBP9Q96S59 729 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 PITPNM3Q9BZ71 974 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 IQCGQ9H095 443 aaKnown RBP22.54■■□□□ 1.2
SMAD1-201ENST00000302085 MUC3BQ9H195 1237 aa22.54■■□□□ 1.2
SMAD1-201ENST00000302085 SLCO1B3Q9NPD5 702 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms