RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NAPEPLDQ6IQ20 393 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 RIPOR1Q6ZS17 1223 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 AGR3Q8TD06 166 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 IGSF8Q969P0 613 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 HMCESQ96FZ2 354 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 SERPINB11Q96P15 392 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 THTPAQ9BU02 230 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 IL22Q9GZX6 179 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 TMEM161AQ9NX61 479 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 MKS1Q9NXB0 559 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 ANGPTL2Q9UKU9 493 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 PDE4DIPQ5VU43 2346 aa22.23■■□□□ 1.15
TPM4-201ENST00000300933 ARHGEF37A1IGU5 675 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 KLF11O14901 512 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 PHGDHO43175 533 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 FGF3P11487 239 aaPredicted RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 ETFBP38117 255 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 COG7P83436 770 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 SEPT6Q14141 434 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 NFE2Q16621 373 aaPredicted RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 MS4A13Q5J8X5 152 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 GRTP1Q5TC63 336 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 MBLAC2Q68D91 279 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 DENND5AQ6IQ26 1287 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 TREML1Q86YW5 311 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 RTL3Q8N8U3 475 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 RBM15BQ8NDT2 890 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 FAM192AQ9GZU8 254 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 CCSER2Q9H7U1 834 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 NT5MQ9NPB1 228 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 PPARGC1AQ9UBK2 798 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 NYNRINQ9P2P1 1898 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 A0A096LPK6 155 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 PQBP1O60828 265 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 ALDH2P05091 517 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 SELPP16109 830 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 DYNC1I2Q13409 638 aaKnown RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 ITGA9Q13797 1035 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 GRM3Q14832 879 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 CRLF3Q8IUI8 442 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 RILPQ96NA2 401 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 CASD1Q96PB1 797 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 PANX3Q96QZ0 392 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 NDNQ99608 321 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 TRIM62Q9BVG3 475 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 MMADHCQ9H3L0 296 aaPredicted RBP22.22■■□□□ 1.15
TPM4-201ENST00000300933 MARCH5Q9NX47 278 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 SOX13Q9UN79 622 aa22.22■■□□□ 1.15
TPM4-201ENST00000300933 ERI2A8K979 691 aaKnown RBP22.21■■□□□ 1.15
TPM4-201ENST00000300933 ADAM12O43184 909 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 GLRA3O75311 464 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 TGDSO95455 350 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 VNN2O95498 520 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 YWHAQP27348 245 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 SPRP35270 261 aaPredicted RBP22.21■■□□□ 1.15
TPM4-201ENST00000300933 GLRBP48167 497 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 NPY2RP49146 381 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 MPP1Q00013 466 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 SLC10A7Q0GE19 358 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 CNGA3Q16281 694 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 LRRC23Q53EV4 343 aaPredicted RBP22.21■■□□□ 1.15
TPM4-201ENST00000300933 KYAT3Q6YP21 454 aaKnown RBP22.21■■□□□ 1.15
TPM4-201ENST00000300933 ARHGAP24Q8N264 748 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 BCL7CQ8WUZ0 217 aaPredicted RBP22.21■■□□□ 1.15
TPM4-201ENST00000300933 HHIPL1Q96JK4 782 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 ECSITQ9BQ95 431 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 SPATA16Q9BXB7 569 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 FSD1LQ9BXM9 530 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 DNAJC16Q9Y2G8 782 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 SLC12A8A0AV02 714 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 CCL22O00626 93 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 PROCP04070 461 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 GABRB3P28472 473 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 CYP2C18P33260 490 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 LIMK2P53671 638 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 ALDH18A1P54886 795 aaKnown RBP22.21■■□□□ 1.15
TPM4-201ENST00000300933 KRT72Q14CN4 511 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 SCUBE1Q8IWY4 988 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 CFAP52Q8N1V2 620 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 VPS39Q96JC1 886 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 TSGA13Q96PP4 275 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 IL12RB2Q99665 862 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 PNPOQ9NVS9 261 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 DCDC2Q9UHG0 476 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 TLR6Q9Y2C9 796 aa22.21■■□□□ 1.15
TPM4-201ENST00000300933 FRMPD3Q5JV73 1810 aa22.2■■□□□ 1.15
TPM4-201ENST00000300933 FGF10O15520 208 aaPredicted RBP22.2■■□□□ 1.14
TPM4-201ENST00000300933 SNNO75324 88 aaPredicted RBP22.2■■□□□ 1.14
TPM4-201ENST00000300933 C2P06681 752 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 IHHQ14623 411 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 GSTA3Q16772 222 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 RAPH1Q70E73 1250 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 BEND5Q7L4P6 421 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 APBB2Q92870 758 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 PSMG2Q969U7 264 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 SLC39A13Q96H72 371 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 C7orf26Q96N11 449 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 NR1H4Q96RI1 486 aaPredicted RBP22.2■■□□□ 1.14
TPM4-201ENST00000300933 NDE1Q9NXR1 346 aa22.2■■□□□ 1.14
TPM4-201ENST00000300933 LRFN2Q9ULH4 789 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms