RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 PGK1P00558 417 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 PSMA1P25786 263 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 ATP6V0D1P61421 351 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 PTPRNQ16849 979 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 ZNF280DQ6N043 979 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 PYDC1Q8WXC3 89 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 CCNT2O60583 730 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 COX4I1P13073 169 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 SRP54P61011 504 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 MAPKAPK3Q16644 382 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 SWI5Q1ZZU3 235 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 ERICH5Q6P6B1 374 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 IL27RAQ6UWB1 636 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 ZNF571Q7Z3V5 609 aaPredicted RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 C11orf74Q86VG3 221 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 ARMC8Q8IUR7 673 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 SIX5Q8N196 739 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 TMEM169Q96HH4 297 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 NT5MQ9NPB1 228 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 UXTQ9UBK9 157 aaPredicted RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 RBM47A0AV96 593 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 RPL21P46778 160 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 PGBD3Q8N328 593 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 CELF1Q92879 486 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 HGH1Q9BTY7 390 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 TDRD1Q9BXT4 1180 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 ELOVL4Q9GZR5 314 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 ABCB10Q9NRK6 738 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 A0A0B4J269 797 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 URADA6NGE7 173 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 MSH4O15457 936 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 COX7A2P14406 83 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 GRIA3P42263 894 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 CLK3P49761 638 aaKnown RBP11.41□□□□□ -0.58
GCN1-201ENST00000300648 HMGCS2P54868 508 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 TUBB3Q13509 450 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 CBWD3Q5JTY5 395 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 CBWD5Q5RIA9 395 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 C4orf19Q8IY42 314 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 NACC2Q96BF6 587 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 FAM118BQ9BPY3 351 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
GCN1-201ENST00000300648 SALL1Q9NSC2 1324 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SLC28A1O00337 649 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 LSM1O15116 133 aaKnown RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 IGSF6O95976 241 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 FOSL2P15408 326 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 BMP7P18075 431 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 ARFIP1P53367 373 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 BAATQ14032 418 aaPredicted RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 DGCR6Q14129 220 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 USP45Q70EL2 814 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 C12orf66Q96MD2 445 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SRP68Q9UHB9 627 aaKnown RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 CARD8Q9Y2G2 431 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 A0A0A0MRY4 1105 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SGPL1O95470 568 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 IDH2P48735 452 aaKnown RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 ZPBP2Q6X784 338 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 TTC7BQ86TV6 843 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SPAG16Q8N0X2 631 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 ARL10Q8N8L6 244 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 GIPC3Q8TF64 312 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 FAR1Q8WVX9 515 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SPATA13Q96N96 652 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 CPVLQ9H3G5 476 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 NCANO14594 1321 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 HDAC3O15379 428 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 PRDX6P30041 224 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 HOXC8P31273 242 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 AIF1P55008 147 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 TMEM44Q2T9K0 475 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 TBC1D10AQ9BXI6 508 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 POMKQ9H5K3 350 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 GSSP48637 474 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 EPHB3P54753 998 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 PLIN5Q00G26 463 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SPIDRQ14159 915 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 PSMD5Q16401 504 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 SLC47A2Q86VL8 602 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 SYT12Q8IV01 421 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 HEXDCQ8WVB3 486 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 ITCHQ96J02 903 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 RUSC1Q9BVN2 902 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 NOL11Q9H8H0 719 aaKnown RBP11.4□□□□□ -0.58
GCN1-201ENST00000300648 OTCP00480 354 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 OMPP47874 163 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 NME5P56597 212 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 GIT2Q14161 759 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 PCID2Q5JVF3 399 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.58
GCN1-201ENST00000300648 FAM20CQ8IXL6 584 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms