RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ATG14Q6ZNE5 492 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 RYBPQ8N488 228 aaPredicted RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 OR6P1Q8NGX9 317 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 MTBPQ96DY7 904 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 PNPLA8Q9NP80 782 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 ANGPTL2Q9UKU9 493 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 HBS1LQ9Y450 684 aaKnown RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 PLIN3O60664 434 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 SORBS2O94875 1100 aaKnown RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 C2P06681 752 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 RALBP11234 206 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 CCR1P32246 355 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 CRHR1P34998 444 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 SLC18A1P54219 525 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 SLC25A3Q00325 362 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 ASPHQ12797 758 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 PTPRCAPQ14761 206 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 MMEL1Q495T6 779 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 HSF5Q4G112 596 aaPredicted RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 C10orf120Q5SQS8 335 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 RAP1GAP2Q684P5 730 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 PAOXQ6QHF9 649 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 CCDC80Q76M96 950 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 BHLHA9Q7RTU4 235 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 WDR75Q8IWA0 830 aaKnown RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 ENDOVQ8N8Q3 282 aaKnown RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 ZBTB8BQ8NAP8 495 aaPredicted RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 KCTD4Q8WVF5 259 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 EXOC2Q96KP1 924 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 GLT1D1Q96MS3 346 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 TRAPPC9Q96Q05 1148 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 ACBD6Q9BR61 282 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 SSU72Q9NP77 194 aaKnown RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 ZNF180Q9UJW8 692 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 APPL1Q9UKG1 709 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 TLK1Q9UKI8 766 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 J3KR12 359 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 F9P00740 461 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CHRNGP07510 517 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CPA3P15088 417 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ANPEPP15144 967 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 TSPAN8P19075 237 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ARRB2P32121 409 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 PPIDQ08752 370 aaKnown RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CTXN3Q4LDR2 81 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RABGAP1LQ5R372 815 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 PTAR1Q7Z6K3 402 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RTN4RL1Q86UN2 441 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CD99L2Q8TCZ2 262 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 VPS39Q96JC1 886 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 GCNAQ96QF7 691 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 WDR55Q9H6Y2 383 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 PTCH2Q9Y6C5 1203 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 OR51F1A6NGY5 319 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 TMEM88BA6NKF7 163 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ADAMTS4O75173 837 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 TSHRP16473 764 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 SPRP35270 261 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 MSX2P35548 267 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 NIPAL4Q0D2K0 466 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 MED21Q13503 144 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 TCHHL1Q5QJ38 904 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ZNF362Q5T0B9 420 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ZNF470Q6ECI4 717 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ITPRIPL1Q6GPH6 555 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 SCD5Q86SK9 330 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CHSY1Q86X52 802 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 SNX31Q8N9S9 440 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RAET1EQ8TD07 263 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 TEKT5Q96M29 485 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CYP2S1Q96SQ9 504 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 GBA3Q9H227 469 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 NEMP2A6NFY4 417 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CA12O43570 354 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 DCXO43602 365 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 GLRA3O75311 464 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 HLA-DQB2P05538 268 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 SLC10A3P09131 477 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CD1EP15812 388 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 NELFEP18615 380 aaKnown RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RPL9P32969 192 aaKnown RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RPL34P49207 117 aaKnown RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 PCLAFQ15004 111 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CTC1Q2NKJ3 1217 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 KCTD21Q4G0X4 260 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ALFQ53S48 1182 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 CLLU1OSQ5K130 101 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 C4orf22Q6V702 233 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 NAPRTQ6XQN6 538 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 LIMS2Q7Z4I7 341 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 SCUBE1Q8IWY4 988 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ZNF781Q8N8C0 355 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RBM15BQ8NDT2 890 aaKnown RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 URGCPQ8TCY9 931 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ELMO2Q96JJ3 720 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 RPRD1AQ96P16 312 aaPredicted RBP10.23□□□□□ -0.77
FOXN4-201ENST00000299162 ECSITQ9BQ95 431 aa10.23□□□□□ -0.77
FOXN4-201ENST00000299162 SPON2Q9BUD6 331 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms