RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 FBXO10Q9UK96 956 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 KLHL20Q9Y2M5 609 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 LCA5LO95447 670 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 COX7A2P14406 83 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 CYP2A13Q16696 494 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 C1orf127Q8N9H9 656 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 BHLHE22Q8NFJ8 381 aaPredicted RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 UTP15Q8TED0 518 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 TBCDQ9BTW9 1192 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 SNX15Q9NRS6 342 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 RABGEF1Q9UJ41 708 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 R3HDM2Q9Y2K5 976 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 OR6C75A6NL08 312 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 LDLRP01130 860 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 GRK4P32298 578 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 NUP107P57740 925 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 SMAD3P84022 425 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 BST1Q10588 318 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 NOMO1Q15155 1222 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 KIAA2013Q8IYS2 634 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 KLHL5Q96PQ7 755 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 STK39Q9UEW8 545 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 AGO1Q9UL18 857 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 CLUHO75153 1309 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 TSPAN8P19075 237 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 TRIP4Q15650 581 aaPredicted RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 C1orf232A0A0U1RR37 186 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 A0A1W2PPM1 405 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 MAPK8P45983 427 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 CYP20A1Q6UW02 462 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
CDCP1-201ENST00000296129 TMEM245Q9H330 911 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 INVSQ9Y283 1065 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ZNF839A8K0R7 811 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 FAM20BO75063 409 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 CYP7B1O75881 506 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 MON1AQ86VX9 555 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ST6GALNAC4Q9H4F1 302 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 SLIT2O94813 1529 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ZMPSTE24O75844 475 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 KCNH1O95259 989 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 TNNI3P19429 210 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ELF3P78545 371 aaPredicted RBP17.39■□□□□ 0.37
CDCP1-201ENST00000296129 TNS4Q8IZW8 715 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ACMSDQ8TDX5 336 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 SELENOMQ8WWX9 145 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 CSPG4P5Q96PW8 444 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 BBS4Q96RK4 519 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ROGDIQ9GZN7 287 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 TMCO1Q9UM00 188 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 GPR25O00155 361 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 SMPD1P17405 629 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ACSM2AQ08AH3 577 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 PTPRNQ16849 979 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 INSCQ1MX18 579 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ACSM2BQ68CK6 577 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ZFP1Q6P2D0 407 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 APLFQ8IW19 511 aaPredicted RBP17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ITFG1Q8TB96 612 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 PYDC1Q8WXC3 89 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 MRPL57Q9BQC6 102 aaKnown RBP17.39■□□□□ 0.37
CDCP1-201ENST00000296129 ADPRHL2Q9NX46 363 aa17.39■□□□□ 0.37
CDCP1-201ENST00000296129 MRPS23Q9Y3D9 190 aaKnown RBP17.39■□□□□ 0.37
CDCP1-201ENST00000296129 GLTPD2A6NH11 291 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 FAM220BPB1ANY3 271 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 RGS5O15539 181 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 HS6ST1O60243 411 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 ADH1AP07327 375 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 CFAP52Q8N1V2 620 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 KLHL28Q9NXS3 571 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 FAM208AQ9UK61 1670 aaKnown RBP17.38■□□□□ 0.37
CDCP1-201ENST00000296129 PEX11AO75192 247 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 SPATA31D3P0C874 917 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 HSMCR30P0CW71 290 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 SLC25A3Q00325 362 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 UBAP2LQ14157 1087 aaKnown RBP17.38■□□□□ 0.37
CDCP1-201ENST00000296129 PACS1Q6VY07 963 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 SPATA31D4Q6ZUB0 917 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 TTPALQ9BTX7 342 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 NLNQ9BYT8 704 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 E7ENQ6 273 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 SQLEQ14534 574 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 MAGEC3Q8TD91 643 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 STK32AQ8WU08 396 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 NDUFA13Q9P0J0 144 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 VPS51Q9UID3 782 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 SERPINI2O75830 405 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 CATP04040 527 aaKnown RBP17.38■□□□□ 0.37
CDCP1-201ENST00000296129 OR1D2P34982 312 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 SOX6P35712 828 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 GSSP48637 474 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 CACNA2D1P54289 1103 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 CDK18Q07002 472 aa17.38■□□□□ 0.37
CDCP1-201ENST00000296129 PAGE2BQ5JRK9 111 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms