RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SCN3BQ9NY72 215 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 FAM208AQ9UK61 1670 aaKnown RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 MDM4O15151 490 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 BEND7Q8N7W2 519 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC39A8Q9C0K1 460 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 NAA20P61599 178 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 CSTF3Q12996 717 aaKnown RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 PLEKHA7Q6IQ23 1121 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 CHST9Q7L1S5 443 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 EIF1ADQ8N9N8 165 aaKnown RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 VPS50Q96JG6 964 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 KLC4Q9NSK0 619 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 ENTPD4Q9Y227 616 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 PRNPP04156 253 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 TLX1P31314 330 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 AADACL2Q6P093 401 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 CYP20A1Q6UW02 462 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZFP14Q9HCL3 533 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 PHPT1Q9NRX4 125 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 AFDNP55196 1824 aaKnown RBP17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 CYP7B1O75881 506 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 TKTP29401 623 aaKnown RBP17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 TRPC1P48995 793 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 LRRC36Q1X8D7 754 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 BTN2A2Q8WVV5 523 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 A0A1B0GVM2 712 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 TCAF2A6NFQ2 919 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 TAS2R40P59535 323 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 TMEM120AQ9BXJ8 343 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 GLOD4Q9HC38 313 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 FBXO6Q9NRD1 293 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 SNTNA6NMZ2 147 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 ETS1P14921 441 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 CCND3P30281 292 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 RFC2P35250 354 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC16A1P53985 500 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZNF792Q3KQV3 632 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 SPDYCQ5MJ68 293 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZFYVE19Q96K21 471 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 KLHL5Q96PQ7 755 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 MYOCQ99972 504 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 POMKQ9H5K3 350 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 PTPRJQ12913 1337 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 FSCN2O14926 492 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 RASSF9O75901 435 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 EPHX1P07099 455 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 PRSS55Q6UWB4 352 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 RBFAQ8N0V3 343 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 OLFM3Q96PB7 478 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 MCCC1Q96RQ3 725 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 CPQQ9Y646 472 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 ADAMTSL3P82987 1691 aa17.88■□□□□ 0.45
CDC42EP3-201ENST00000295324 TPST1O60507 370 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 PFKMP08237 780 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 PIRTP0C851 137 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 PLK1P53350 603 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 GDF6Q6KF10 455 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 C12orf50Q8NA57 414 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 P2RY11Q96G91 374 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 RPL17P18621 184 aaKnown RBP17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 PSMA3P25788 255 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 FLT3P36888 993 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ERVK-21P61565 698 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ITIH4Q14624 930 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 KLHL35Q6PF15 583 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 PAWRQ96IZ0 340 aaKnown RBP17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 EFR3BQ9Y2G0 817 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 TBC1D30Q9Y2I9 924 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 MYBPHLA2RUH7 354 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ALBP02768 609 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 HPCAL1P37235 193 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 GAD2Q05329 585 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ZNF662Q6ZS27 426 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC4A11Q8NBS3 891 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ING5Q8WYH8 240 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 PLD4Q96BZ4 506 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 GDF3Q9NR23 364 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 CCDC166P0CW27 439 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 TCEA2Q15560 299 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 SIKE1Q9BRV8 207 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 CREBZFQ9NS37 354 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 E9PAM4 449 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 GTF2E2P29084 291 aaKnown RBP17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 CDH4P55283 916 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 CRADDP78560 199 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 GALNT3Q14435 633 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ADAMTSL2Q86TH1 951 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 VPS33AQ96AX1 596 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 FEM1CQ96JP0 617 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 CSPG4P5Q96PW8 444 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 OSBPL1AQ9BXW6 950 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ABCG4Q9H172 646 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 ALG9Q9H6U8 611 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 MAPRE3Q9UPY8 281 aa17.87■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC38A8A6NNN8 435 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 SGTAO43765 313 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 PTPN9P43378 593 aa17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 ACTN3Q08043 901 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP3-201ENST00000295324 C11orf74Q86VG3 221 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms