RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 DUSP28Q4G0W2 176 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 PTCD3Q96EY7 689 aaKnown RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ST3GAL5Q9UNP4 418 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 CORO2BQ9UQ03 480 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 NCKAP1Q9Y2A7 1128 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF510Q9Y2H8 683 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 FAM47E-STBD1D6RA91 191 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 STK32CQ86UX6 486 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ALG3Q92685 438 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 PURBQ96QR8 312 aaKnown RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 TRMOQ9BU70 441 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 LRMDAQ9H2I8 198 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 TRIM38O00635 465 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ARF4P18085 180 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 CYP3A5P20815 502 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 SLC44A4Q53GD3 710 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ADAMTSL2Q86TH1 951 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 MON1AQ86VX9 555 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 IQCKQ8N0W5 287 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 SEMA4DQ92854 862 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 SEMA4BQ9NPR2 832 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 SNX8Q9Y5X2 465 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 B4GALT5O43286 388 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ALDH9A1P49189 494 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 CLK2P49760 499 aaKnown RBP12.92□□□□□ -0.34
PTCD1-201ENST00000292478 GNA13Q14344 377 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 USP41Q3LFD5 358 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 RORBQ92753 470 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 PIF1Q9H611 641 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 ASB8Q9H765 288 aa12.92□□□□□ -0.34
PTCD1-201ENST00000292478 TCRBV9S1A1TA0A576 114 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 CILPO75339 1184 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 WEE1P30291 646 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 ARL2P36404 184 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PLK1P53350 603 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 INTS6LQ5JSJ4 861 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 BHLHE22Q8NFJ8 381 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PTCD2Q8WV60 388 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 IRGQQ8WZA9 623 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PRPF19Q9UMS4 504 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 HS6ST1O60243 411 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 CLTBP09497 229 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 COL6A2P12110 1019 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 TFEBP19484 476 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 HADHBP55084 474 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 TNK2Q07912 1038 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 ARHGAP17Q68EM7 881 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 AAGABQ6PD74 315 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PACS1Q6VY07 963 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 SPAG4Q9NPE6 437 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 FAM50BQ9Y247 325 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 HES2Q9Y543 173 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 NOL4O94818 638 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 C4BPBP20851 252 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 TALDO1P37837 337 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 TSNQ15631 228 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 FNDC3BQ53EP0 1204 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 MON1BQ7L1V2 547 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 XYLT1Q86Y38 959 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 UTP15Q8TED0 518 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 SELENOMQ8WWX9 145 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 NKD2Q969F2 451 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 NMD3Q96D46 503 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 RPS6KA6Q9UK32 745 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 TGDSO95455 350 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 CCNE2O96020 404 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 COX7A2P14406 83 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 LPOP22079 712 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 OTUD3Q5T2D3 398 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 MFSD4BQ5TF39 518 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 FOXR1Q6PIV2 292 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 SLC4A11Q8NBS3 891 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 CAPN10Q9HC96 672 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 FAM105AQ9NUU6 356 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 EDF1O60869 148 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 WFS1O76024 890 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 FTH1P02794 183 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PSMB9P28065 219 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 IRF8Q02556 426 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 ANKRD23Q86SG2 305 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PRCCQ92733 491 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 PROX1Q92786 737 aa12.91□□□□□ -0.34
PTCD1-201ENST00000292478 MTERF3Q96E29 417 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms