RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 HAUS4Q9H6D7 363 aa10.65□□□□□ -0.7
SNF8-201ENST00000290330 ZDHHC6Q9H6R6 413 aa10.65□□□□□ -0.7
SNF8-201ENST00000290330 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
SNF8-201ENST00000290330 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
SNF8-201ENST00000290330 ZFR2Q9UPR6 939 aaKnown RBP10.65□□□□□ -0.7
SNF8-201ENST00000290330 WASH4PA8MWX3 477 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 TMCO5BA8MYB1 307 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 CREB3O43889 395 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 GSRP00390 522 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 CAPNS1P04632 268 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 GKP32189 559 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 PRKCIP41743 596 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 YBEYP58557 167 aaPredicted RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 SNRPD1P62314 119 aaKnown RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 NR1I3Q14994 352 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 ASIC2Q16515 512 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 TMEM259Q4ZIN3 620 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 SFMBT2Q5VUG0 894 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 LEKR1Q6ZMV7 388 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 PARS2Q7L3T8 475 aaKnown RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 KANSL1Q7Z3B3 1105 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 ZNF571Q7Z3V5 609 aaPredicted RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 TMC6Q7Z403 805 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 UMODL1-AS1Q8N2C9 162 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 RYBPQ8N488 228 aaPredicted RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 EID2Q8N6I1 236 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 ZCCHC14Q8WYQ9 949 aaKnown RBP10.64□□□□□ -0.71
SNF8-201ENST00000290330 EPAS1Q99814 870 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 TTYH3Q9C0H2 523 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 KLC2Q9H0B6 622 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 FZD3Q9NPG1 666 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 IMPACTQ9P2X3 320 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
SNF8-201ENST00000290330 TMEM191CA6NGB0 347 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 ZSCAN5CA6NGD5 496 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 SRRM3A6NNA2 597 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 C16orf96A6NNT2 1141 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 RASA4BC9J798 803 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 KRIT1O00522 736 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 DDX3XO00571 662 aaKnown RBP eCLIP10.63□□□□□ -0.714e-14■■■■■ 27.5
SNF8-201ENST00000290330 ENC1O14682 589 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 RASA4O43374 803 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 BUB1O43683 1085 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 AP1G1O43747 822 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 NRDCO43847 1150 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 TMCC1O94876 653 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 POP4O95707 220 aaKnown RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 LDOC1O95751 146 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 PAK4O96013 591 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 THEGLP0DJG4 465 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 GZMAP12544 262 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 DESP17661 470 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 PSMA2P25787 234 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 AKT2P31751 481 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 CLDN2P57739 230 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 GSDMDP57764 484 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 RPS21P63220 83 aaKnown RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 SERINC3Q13530 473 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 FGL2Q14314 439 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 SMAD1Q15797 465 aaKnown RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 MYLK3Q32MK0 819 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 INO80DQ53TQ3 878 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 CCDC157Q569K6 752 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 ZNF805Q5CZA5 627 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 KIAA1161Q6NSJ0 714 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 DHRS13Q6UX07 377 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 GCNT7Q6ZNI0 430 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 ABI3BPQ7Z7G0 1075 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 ZNF354CQ86Y25 554 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 DNAAF5Q86Y56 855 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 ARFGAP1Q8N6T3 406 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 OR13H1Q8NG92 308 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 CASKIN2Q8WXE0 1202 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 HMCESQ96FZ2 354 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 FEM1CQ96JP0 617 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 CNDP2Q96KP4 475 aaKnown RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 SLC17A9Q9BYT1 436 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 EDEM3Q9BZQ6 932 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 CATSPERBQ9H7T0 1116 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 GPATCH2LQ9NWQ4 482 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 PCDHGA1Q9Y5H4 931 aa10.63□□□□□ -0.71
SNF8-201ENST00000290330 KMT2BQ9UMN6 2715 aaPredicted RBP10.63□□□□□ -0.71
SNF8-201ENST00000290330 USP24Q9UPU5 2620 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 TAF4O00268 1085 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 FGF10O15520 208 aaPredicted RBP10.62□□□□□ -0.71
SNF8-201ENST00000290330 TSPAN6O43657 245 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 SDC3O75056 442 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 SERPINC1P01008 464 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 FTLP02792 175 aaPredicted RBP10.62□□□□□ -0.71
SNF8-201ENST00000290330 UGT2B4P06133 528 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 SKILP12757 684 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 HTR7P34969 479 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 ABL2P42684 1182 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 TPI1P60174 286 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
SNF8-201ENST00000290330 DNAJC3Q13217 504 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms