RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 NR4A1P22736 598 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 PTPN3P26045 913 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 GABRB3P28472 473 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 RHDQ02161 417 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL8A1-202ENST00000273342 ADIGQ0VDE8 80 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 CSHL1Q14406 222 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 REP15Q6BDI9 236 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 OTOP3Q7RTS5 596 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 CENPLQ8N0S6 344 aaPredicted RBP13.07□□□□□ -0.32
COL8A1-202ENST00000273342 KDM1BQ8NB78 822 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 SPATA22Q8NHS9 363 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 HMGCLL1Q8TB92 370 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 EXT2Q93063 718 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 PDZD7Q9H5P4 517 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 PLGRKTQ9HBL7 147 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 CACNA2D2Q9NY47 1150 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
COL8A1-202ENST00000273342 SH3PXD2BA1X283 911 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 KCNA5P22460 613 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 ALDH3B2P48448 385 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 TXNL4AP83876 142 aaKnown RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 CAPRIN1Q14444 709 aaKnown RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 LDLRAP1Q5SW96 308 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 BORAQ6PGQ7 559 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 C16orf87Q6PH81 154 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 PSTKQ8IV42 348 aaKnown RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 TXNDC5Q8NBS9 432 aaKnown RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 LZICQ8WZA0 190 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 CXorf21Q9HAI6 301 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 DUS2Q9NX74 493 aaKnown RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 RGPD3A6NKT7 1758 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 RGPD4Q7Z3J3 1758 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 MRASO14807 208 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 AURKAO14965 403 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 TIMM44O43615 452 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 JCHAINP01591 159 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 CHRM3P20309 590 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 MAGEA8P43361 318 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 RXRGP48443 463 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 CD300CQ08708 224 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 ZBTB17Q13105 803 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 ADRM1Q16186 407 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 ANO4Q32M45 955 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 ZBTB8BQ8NAP8 495 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 POLR1BQ9H9Y6 1135 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 PAIP2BQ9ULR5 123 aaKnown RBP13.06□□□□□ -0.32
COL8A1-202ENST00000273342 ACOT9Q9Y305 439 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 PTGDR2Q9Y5Y4 395 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 EVPLQ92817 2033 aa13.06□□□□□ -0.32
COL8A1-202ENST00000273342 UBDO15205 165 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 B4GAT1O43505 415 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ZBTB11O95625 1053 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 PGK1P00558 417 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ERCC2P18074 760 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 USP41Q3LFD5 358 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 TBCELQ5QJ74 424 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 METTL7BQ6UX53 244 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 TMEM135Q86UB9 458 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ZC3HC1Q86WB0 502 aaKnown RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 DCPSQ96C86 337 aaKnown RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ELMO2Q96JJ3 720 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 MLPHQ9BV36 600 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 FZD10Q9ULW2 581 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 TADA2AO75478 443 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 CABYRO75952 493 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 MT-CYBP00156 380 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ATP6V1B2P21281 511 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 LRPAP1P30533 357 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ATICP31939 592 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 TSTD2Q5T7W7 516 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 GPR180Q86V85 440 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 DHFR2Q86XF0 187 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 CPSF7Q8N684 471 aaKnown RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 GPR20Q99678 358 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 C1QTNF1Q9BXJ1 281 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 OSBPL2Q9H1P3 480 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ZNF385DQ9H6B1 395 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 SLC2A6Q9UGQ3 507 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 MTF2Q9Y483 593 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 COL4A5P29400 1685 aa13.05□□□□□ -0.32
COL8A1-202ENST00000273342 ZNF182P17025 639 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-202ENST00000273342 EEF1B2P24534 225 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms