RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 KCNC2Q96PR1 638 aa10.08□□□□□ -0.8
LRTM1-201ENST00000273286 TWNKQ96RR1 684 aa10.08□□□□□ -0.8
LRTM1-201ENST00000273286 ITM2CQ9NQX7 267 aa10.08□□□□□ -0.8
LRTM1-201ENST00000273286 RASAL2Q9UJF2 1139 aa10.08□□□□□ -0.8
LRTM1-201ENST00000273286 EFR3BQ9Y2G0 817 aa10.08□□□□□ -0.8
LRTM1-201ENST00000273286 ATRXP46100 2492 aa10.08□□□□□ -0.8
LRTM1-201ENST00000273286 FAM237AA0A1B0GTK4 181 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 A0A1B0GVL5 298 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SPAARA0A1B0GVQ0 90 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 B8ZZF3 427 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 CBFA2T2O43439 604 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 GJB3O75712 270 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 LATS1O95835 1130 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 CD59P13987 128 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 VAMP1P23763 118 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 CORO1AP31146 461 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 HARS2P49590 506 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 YWHAEP62258 255 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 PPP3CAQ08209 521 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TCEAL1Q15170 157 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TRIP6Q15654 476 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 MPPE1Q53F39 396 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 RAB41Q5JT25 222 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ARHGAP17Q68EM7 881 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SCD5Q86SK9 330 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TMPRSS6Q8IU80 811 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 IGDCC3Q8IVU1 814 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 FAM217AQ8IXS0 508 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 DEFB119Q8N690 84 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ANKRD52Q8NB46 1076 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 WFIKKN2Q8TEU8 576 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SIPA1Q96FS4 1042 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TOE1Q96GM8 510 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 C20orf173Q96LM9 149 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 NUP58Q9BVL2 599 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 GTPBP4Q9BZE4 634 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SCAND2PQ9GZW5 306 aaPredicted RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 CISHQ9NSE2 258 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 RAB20Q9NX57 234 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ELOVL2Q9NXB9 296 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 PLK2Q9NYY3 685 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 MARCH2Q9P0N8 246 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 NUDT5Q9UKK9 219 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 APOBEC2Q9Y235 224 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 RAD54BQ9Y620 910 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SRRM3A6NNA2 597 aaPredicted RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 MDM4O15151 490 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 CETN3O15182 167 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ZBED1O96006 694 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 KLKB1P03952 638 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TRIM49P0CI25 452 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TRIM49CP0CI26 452 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 NCAM1P13591 858 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 TPMTP51580 245 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 BCAT1P54687 386 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 YWHAGP61981 247 aaKnown RBP eCLIP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 POU4F1Q01851 419 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ZBTB16Q05516 673 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 EFEMP1Q12805 493 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 GEN1Q17RS7 908 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 PM20D1Q6GTS8 502 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SERPINA13PQ6UXR4 307 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 GLRX5Q86SX6 157 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 PIGZQ86VD9 579 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 DENND1CQ8IV53 801 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 NAXDQ8IW45 347 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 SCML4Q8N228 414 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ADCY4Q8NFM4 1077 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 DDI1Q8WTU0 396 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ADAMTS14Q8WXS8 1223 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 PIWIL1Q96J94 861 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 CIPCQ9C0C6 399 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 AGO1Q9UL18 857 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 PLA2G4CQ9UP65 541 aa10.07□□□□□ -0.8
LRTM1-201ENST00000273286 HBS1LQ9Y450 684 aaKnown RBP10.07□□□□□ -0.8
LRTM1-201ENST00000273286 ZFYVE26Q68DK2 2539 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 ANKRD11Q6UB99 2663 aaPredicted RBP10.06□□□□□ -0.8
LRTM1-201ENST00000273286 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 WASH3PC4AMC7 463 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 PRRG2O14669 202 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 XPO1O14980 1071 aaKnown RBP10.06□□□□□ -0.8
LRTM1-201ENST00000273286 BCAT2O15382 392 aaPredicted RBP10.06□□□□□ -0.8
LRTM1-201ENST00000273286 FLRT2O43155 660 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 EPHX1P07099 455 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 MATKP42679 507 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 IL12RB1P42701 662 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 TKTL1P51854 596 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 BST2Q10589 180 aaKnown RBP10.06□□□□□ -0.8
LRTM1-201ENST00000273286 GRIK2Q13002 908 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 ZNF234Q14588 700 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 NR1I3Q14994 352 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 ZCWPW2Q504Y3 356 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 MPP7Q5T2T1 576 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 FAM129CQ86XR2 697 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 SLC4A11Q8NBS3 891 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms